Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7 152 1e-31 seq2 125 2e-23 seq6 95.1 3e-14 seq11 93.3 1e-13 >seq7 Length=1356190 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||||||||| |||| |||||| || | | ||| | || || Sbjct 309281 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCGTCC 309340 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||||||||||||||| || || || || ||| Sbjct 309341 TCGAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 309400 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| |||| |||||| | || || || |||| ||||||||| Sbjct 309401 TGAATCTTCGCCTTCACATTGTCGATGGTGTCAGATGACTCGACCTCCAGGGTGATCGTC 309460 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || Sbjct 309461 TTGCCCGTGAGGGTCTTGACGAAGATCTG 309489 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| || |||||||| |||| ||||||||| | | || | ||||| Sbjct 309509 AGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGACCATCC 309568 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||| || ||||||||||| ||| || || || ||| Sbjct 309569 TCCAGCTGCTTCCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 309628 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||||| | || || || | ||||| ||| Sbjct 309629 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCGAGGGTGATGGTC 309688 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || || || || || Sbjct 309689 TTCCCGGTCAAGGTCTTGACGAAGATCTG 309717 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| || ||||||||||| || | ||||||||||| | || | || || |||| Sbjct 309057 CAAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCA 309116 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| ||||||||||| || ||||||||||| ||| ||| || || ||||| | Sbjct 309117 GCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTATCCTGGA 309176 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| |||| || || | | || || || | |||||||||||| | Sbjct 309177 TCTTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCAACCTCGAGCGTGATCGTCTTGC 309236 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || | || || || || ||||| Sbjct 309237 CGGTCAACGTCTTGACGAAGATTTG 309261 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || || ||||||||||| || | ||||||||| | ||| || | ||||| || ||| Sbjct 309796 AGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCAAGC 309855 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || ||||| |||||||||||||| || || || || ||||| ||| Sbjct 309856 TGCTTGCCAGCAAAGATAAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATC 309915 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| ||| |||| |||||| | | || || || | ||||| ||||| ||| Sbjct 309916 TTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCC 309975 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || Sbjct 309976 GTGAGGGTCTTAACGAAGATCTG 309998 Score = 104 bits (114), Expect = 6e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||||||||| |||||||| |||| ||||||||| | | ||| | |||||| Sbjct 310018 AGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCT 310077 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || |||||||| ||||| ||||| || ||||||||||| ||| Sbjct 310078 TCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGA 310119 >seq2 Length=2907307 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || ||||| ||||||||||| |||| |||||| || | | || | || || Sbjct 2173225 AGCACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCGTCC 2173166 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| || ||||||||||| || || || || ||| Sbjct 2173165 TCAAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 2173106 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | || || || | |||||||||| Sbjct 2173105 TGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGCGTGATCGTC 2173046 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || ||||| || || || Sbjct 2173045 TTCCCCGTGAGCGTCTTCACGAAGATCTG 2173017 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| || | ||||||||| | | || | ||||| Sbjct 2172997 AGCACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGCCCATCC 2172938 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| |||||||||||||||||||||||||| || Sbjct 2172937 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGG 2172897 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| | || || | || || Sbjct 2172713 AGGACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACCGTCC 2172654 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || || ||||| || ||||||||||| || Sbjct 2172653 TCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGG 2172613 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || ||||||||||| || | ||||||||||| | || | || || Sbjct 2173504 AGGACCAAGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAAAGCGTGCGACCGTCC 2173445 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||| |||||| ||||||||||| || ||||||||||| || Sbjct 2173444 TCCAACTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGG 2173404 >seq6 Length=1546939 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||| |||||||| || |||||| |||| ||||||||| | | || Sbjct 1352832 CGAAGACGCAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 1352773 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | ||||| || |||||||| ||||||||||| || ||||||||||| || Sbjct 1352772 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGG 1352723 >seq11 Length=779764 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||||||||||||||| |||| ||||||||| | | || | || || Sbjct 380640 AGCACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGCCCGTCC 380581 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || || |||||||||||||||||||| || Sbjct 380580 TCGAGCTGCTTGCCCGCAAAGATGAGACGCTGCTGGTCGGG 380540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918125865410