Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq15 179 5e-40 seq18 143 3e-29 seq13 82.4 1e-10 >seq15 Length=713271 Score = 179 bits (198), Expect = 5e-40 Identities = 265/373 (71%), Gaps = 2/373 (1%) Strand=Plus/Plus Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 ||||||||| ||||| | || ||||| ||||| ||||| |||||||| || | || || Sbjct 112033 GATGGCGGCCTGGACGGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTGATGCTCTTGTT 112092 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACAT-TTGTTGAATTTTCGGGATTCGTGTCG 7139 | || || ||||| || | ||||| | | || ||| | |||||| ||||||| Sbjct 112093 GGGCTCCTTGCCGTTGAAGAAGTCCGACACGAGCTTCATGA-TGCGCGGGATACGTGTCG 112151 Query 7140 ATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTG 7199 | |||||||| | ||||| || | || ||||| || |||||||| ||||| || || Sbjct 112152 AGCCACCGACGAGGACGATCTCGTGGACGTTCGACTTGTCGATCTTCGAGTCCCGGAGAA 112211 Query 7200 TTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259 || ||||| || || | | ||||||| |||| ||||| ||||| || || | Sbjct 112212 CCTTCTCGACGGGCTCGAGCGTGCTGCGGAACAGGTCCTGGCACAGCTCCTCGAAGCGGG 112271 Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319 | ||||| | ||| || ||||| || | ||| ||||| | ||| || || || |||| | Sbjct 112272 CGCGGGTGAGGGAGGTGTAGAAGTCGATGCCCTCGTAGAGCGAGTCGATCTCGATGGAGG 112331 Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 | || | | || || | || ||||| || ||||| || || || || | ||||||| Sbjct 112332 TCTGGGTGGCGGAGGAGAGGGTGCGCTTGGCACGCTCGCAAGCAGTGCGCAGGCGACGAA 112391 Query 7380 GGGCACGCGGGTT 7392 ||||||||||||| Sbjct 112392 GGGCACGCGGGTT 112404 Score = 132 bits (146), Expect = 6e-26 Identities = 142/187 (76%), Gaps = 3/187 (2%) Strand=Plus/Plus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| | |||||||| || ||||||||||||||||| |||| ||||| ||| Sbjct 113128 GTGTTATGCGGGTTCATCGCGACCTGGTTCTTCGCCGCGTCACCGACGAGACGCTCAGAG 113187 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | || || |||||||| || |||||||| || || || |||||||| ||||| || Sbjct 113188 T---CGGTGAAGGCGACGTAGGACGGGGTCGTGCGGTTACCCTGGTCGTTGGCAATGATC 113244 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143 || || ||||| ||||||||||| |||||||| || || || || || | ||||| ||| Sbjct 113245 TCGACACGGTCATTTTGCCAGACACCGACGCAAGAGTAGGTGGTGCCCAGGTCAATGCCG 113304 Query 8144 ATTGCTT 8150 | |||| Sbjct 113305 ACAGCTT 113311 Score = 129 bits (142), Expect = 7e-25 Identities = 264/387 (68%), Gaps = 8/387 (2%) Strand=Plus/Minus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || | || | ||| || |||||||| | || | | || Sbjct 487652 GTGCGCTTGGCACGCTCGCATGCGGAGCGGAGACGGCGGAGGGCACGGGCGTCATCAGAG 487593 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATC 7458 || || ||| || || || ||||| | |||||| |||| |||| | || Sbjct 487592 ATGTCGAGCTTCGTCTTGCGCTTGAACTCGTTCTTGAAGTGCTCGA-GGAGCGTGTTGTC 487534 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 ||| || |||||||||||||| || || || || ||||| ||||| | |||| ||| || Sbjct 487533 GAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTCGCCTTGACGGCGAAGACACCACC 487474 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 ||||| | | || ||||| || |||||||| || || || || ||||| ||||| Sbjct 487473 AGAGATGTTCAGGAGGGAGACATCGAAGGTACCACCGCCGAGATCGAAGATGAGAACGTT 487414 Query 7579 CGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || || ||| | || | || |||||||| ||||| || || || || || || Sbjct 487413 --TTTCTCCGACTTCG-ACTGACGGTCAAGACCGTAGGCGATGGCGGCGGCGGTCGGCTC 487357 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || || || || || || | | || || || || || | || Sbjct 487356 GTTGATGATACGGAGGACGTCAAGACCGGCGATCGCGCCGGCGTCCTTGGTTGCCAGACG 487297 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGAC 7722 ||||| ||||| |||||||| || || Sbjct 487296 CTGCGAGTCGTTGAAGTAGGCGGGTAC 487270 >seq18 Length=626427 Score = 143 bits (158), Expect = 3e-29 Identities = 265/386 (69%), Gaps = 2/386 (1%) Strand=Plus/Plus Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 |||||||| ||||| | || | ||| ||||| |||| |||||||| || | || || Sbjct 217838 GATGGCGGTCTGGACGGCAGCACAGTAGGCGACGGCCTTGTCGGGGTTGATGCTCTTGTT 217897 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACAT-TTGTTGAATTTTCGGGATTCGTGTCG 7139 | || || ||||| || | ||||| | | || ||| | |||||| || || | Sbjct 217898 GGGCTCCTTGCCGTTGAAGAAGTCCGACACGAGCTTCATGA-TGCACGGGATACGGGTTG 217956 Query 7140 ATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTG 7199 | |||||||| | ||||| || | || ||||| || |||||||| ||||| || || Sbjct 217957 AGCCACCGACGAGGACGATCTCGTGGACGTTCGACTTGTCGATCTTCGAGTCCCGGAGAA 218016 Query 7200 TTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259 || ||||| || || | | | |||||||||| ||||| ||||| || || | Sbjct 218017 CCTTCTCGACGGGCTCGAGCGTGCTGCAGAACAAGTCCTGGCACAGCTCCTCGAAGCGGG 218076 Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319 ||||||| | ||| || ||| | || | ||| ||||| | || | || || |||| | Sbjct 218077 CACGGGTGAGGGAGGTGTAGCAGTCGATGCCCTCGTACAGGGAGTTGATCTCGATGGAGG 218136 Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 | || | | || || | || ||||| || | ||| ||||| || || | ||||| | Sbjct 218137 TCTGGGTGGCGGAGGAGAGGGTGCGCTTGGCACACTCGCACGCGGTGCGCAGGCGACGGA 218196 Query 7380 GGGCACGCGGGTTACCGGAAATATCT 7405 ||||||||||||| ||| | |||| Sbjct 218197 GGGCACGCGGGTTCGAGGAGAGATCT 218222 >seq13 Length=729597 Score = 82.4 bits (90), Expect = 1e-10 Identities = 172/256 (67%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||| | || || || || ||||| || ||| || |||| ||| Sbjct 451373 TCGAAGTCCTCGCCACCAAGATGCGTGTCACCAGCGGTGGCCAAGACCTCGAAGACACCG 451314 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | || ||||| || ||||||||||| || || | | || | Sbjct 451313 TCGTCGATGGAGAGGAGGGAGACATCGAAGGTACCACCACCGAGATCGTAGACGATGATC 451254 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || ||| || | || || || ||||||||||||||| || || ||||| || ||| Sbjct 451253 TGCGACTCGCCGCCCTTCTTGTT---GAGACCGTACGCGATGGCGGCGGCCGTGGGCTCA 451197 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || | || || || || || | || || || || || || || Sbjct 451196 TTGATGATACGGAGGACCTCGAGACCGGCGATCGTACCGGCGTCCTTGGTTGCCTGGCGC 451137 Query 7697 TGCGAATCGTTAAAGT 7712 || | ||||| |||| Sbjct 451136 TGAGCGTCGTTGAAGT 451121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130973993200