Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 120 4e-22 seq50 93.3 5e-14 seq45 93.3 5e-14 seq36 93.3 5e-14 seq22 93.3 5e-14 seq19 93.3 5e-14 seq5 93.3 5e-14 seq3 93.3 5e-14 >seq2 Length=2907307 Score = 120 bits (132), Expect = 4e-22 Identities = 323/485 (67%), Gaps = 12/485 (2%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||||||||| || || || | || || || || | ||| | ||| ||| | Sbjct 632269 CGATCGAAACGGCCGGGACGCATGAGCGCGGGGTCGAGCACGTCGGGCCTGTTGGTACCA 632328 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 |||| ||| || ||| || || ||||||| ||||| || ||| |||||||| Sbjct 632329 GCAAGGACGACGATGTGCTCGTCCGTGCCGAAACCATCCATCTCGACGAGGAGCTGGTTC 632388 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACC--TGCCGAACGCTTCTTACCGA 11680 | |||| || ||||| |||||| | ||| || |||| |||| ||| |||| Sbjct 632389 AGCGTCGACTCGCGCTCGTCGTTGCCGCCCATGTTGCCCTTGCC--ACGCGCCTTGCCGA 632446 Query 11681 CAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGT-GCCTGTTCGAAA 11739 ||||| |||||||||| ||| | ||| ||||| || | | | ||| |||| Sbjct 632447 TGGCGTCGATCTCATCGACGAAGATGATGCACGGCGCGT-GCTTCTTCGCCGACGCGAAG 632505 Query 11740 AGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAA 11799 || || || ||||| | || ||||| ||||||||||| ||||| | | | | || Sbjct 632506 AGGTCGCGGACACGTGCAGAACCGACACCGACGAACATCTCGACGAACTCGGAGCCCGAG 632565 Query 11800 CACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACC 11858 || || | |||||| || | ||| || ||| | || ||||| || |||||||| Sbjct 632566 -ACGGACAGGAAGGGCACGGAGGCCTCGCCTGCGGTCGCCTTCGCGAGCAGCGTCTTACC 632624 Query 11859 CGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTCCAAAG 11916 ||||||||| | || | | | ||| || || |||||||| ||||| |||| | Sbjct 632625 CGTACCAGGAGGGCCGGACAAGATGGCACCGCGTGGGATCTTCGCACCGAGCTTC--GTG 632682 Query 11917 TAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCG 11976 |||| | |||| ||||||||| | || | |||| | ||| ||||||| ||| Sbjct 632683 AAGCGTTGCGGCTCCTTGAGGAACTTGACGAACTCCATGATCTCCACCTTGGCCTCGTCC 632742 Query 11977 ATACC 11981 ||||| Sbjct 632743 ATACC 632747 >seq50 Length=196737 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 108667 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 108725 >seq45 Length=219965 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 126237 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 126179 >seq36 Length=329018 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 18348 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 18406 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 23894 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 23836 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 83801 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 83743 Score = 89.7 bits (98), Expect = 6e-13 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCC 136773 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct 32361 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCC 32305 >seq22 Length=538561 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 330375 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 330433 >seq19 Length=603150 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 24851 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 24793 >seq5 Length=1587088 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 203217 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 203275 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 209588 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 209646 >seq3 Length=1901115 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 593496 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 593554 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 1286186 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 1286244 Score = 91.5 bits (100), Expect = 2e-13 Identities = 172/252 (68%), Gaps = 11/252 (4%) Strand=Plus/Plus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || | ||| || || |||| ||||||||| || |||| || || Sbjct 1719995 GGCAAAGTCGGTGTGCATCCCCTCGTCGCGAGTGATGAGCTCGTTGGAGAAGGTGAGACC 1720054 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| |||||| ||| || || || |||||||| Sbjct 1720055 GGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGCTGGCAAAGCTGCCGGAGAAGAAGAT 1720114 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACG-----CTCAGCA--AAAGGTCGAGACTTGT 119667 ||||| || ||||||||||| || || | || | || ||||| | || Sbjct 1720115 ACCCTCGACGGCGGCGAAAGCGACGAGGCGGATACCGAAGGAAGAACGGTCG----TCGT 1720170 Query 119668 CGAACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTT 119727 || |||| ||||||||| | ||||| ||| | | ||||||| || | || ||| | Sbjct 1720171 TGATCCACCGGAGAGCCCACTGCGCCTTGCGCGCGACACAGGGGATGGTCTCGACGGCGT 1720230 Query 119728 CGAAAAGTTGCT 119739 ||| || |||| Sbjct 1720231 TGAAGAGATGCT 1720242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974306694000