Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq55 120 9e-22 seq2 95.1 4e-14 >seq55 Length=162121 Score = 120 bits (132), Expect = 9e-22 Identities = 183/261 (70%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| | ||||||||| |||||||| || | || || || || |||||||| || Sbjct 122924 CTTGACGAGACGACGCTGGATATAACCGGTCTCGGCGGTCTTGACGGCCGTATCAATGAG 122983 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAA 302702 ||| |||||||| |||||| |||||||| | ||| | |||| || || | | | Sbjct 122984 ACCTTCACGACCAGACATAGCGTGGAAGAAGAACTCCTGCGGTGTGAGGCCACGCAAGTA 123043 Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAG 302762 ||| |||| |||||||| || | || || | |||| |||||| ||||| ||||| Sbjct 123044 CGAGTTCTCGACGAAACCGCGGGATTCTGGACTGTAGTCGTCCTTGGTGAAGTGCGGCAG 123103 Query 302763 GGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCA 302822 || | | ||||| | ||||||||||| || || || ||||||| || | ||| Sbjct 123104 AGTGCGATGACGGAAGCCGAAGGGGATACGCTTGCCCTCCACACTCTGCTGCCCGACGCA 123163 Query 302823 CGAAATCATCTGCGAAATATT 302843 | | ||||||||| || || Sbjct 123164 CACAGACATCTGCGAGATGTT 123184 >seq2 Length=2907307 Score = 95.1 bits (104), Expect = 4e-14 Identities = 156/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 251416 CACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTG 251475 ||| ||| || || || | | ||| ||||| |||||||| | | ||| |||| | Sbjct 1934194 CACATATCGCAAACGTGCAGTCGGTACGCATCCGATGCGTCGAACAACCGCTCCTTCAAG 1934253 Query 251476 AAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCA 251535 || | || ||| || || ||||||||||| |||||||| || |||||||| |||||| Sbjct 1934254 AACCCAGCAATACCATGCGAGATCATACAATCGCGCTCCATCTCTCCGAAACGCAGACCA 1934313 Query 251536 CCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAG 251595 || || ||| | |||||| | ||||| || || | | || || || | | | Sbjct 1934314 CCGTCACGACTACGACCCTCCACCGGCTGGCGCGTCAAGATCTGCACCGGCCCTCTCGCG 1934373 Query 251596 CGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAG 251640 || || ||| || | |||||||||||||||||||||||| Sbjct 1934374 CGCGAGTGGATCTTGTCGTCCACCATATGCTTGAGACGCTGGTAG 1934418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471813262737510