Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 176 7e-38 seq1 161 2e-33 seq21 120 5e-21 seq8 120 5e-21 seq14 109 9e-18 seq2 102 1e-15 seq5 96.9 5e-14 >seq3 Length=1901115 Score = 176 bits (194), Expect = 7e-38 Identities = 238/330 (72%), Gaps = 9/330 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||||||| |||| | |||||| ||| ||| ||||||||||| ||||||||| Sbjct 1720014 CCCTCGTCGCGAGTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTTC 1720073 Query 794401 TTGAGCCAAAAGA---TGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 |||||||| |||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct 1720074 TTGAGCCAGAAGATGCTGGCA---AAGCTGCCGGAGAAGAAGATACCCTCGACGGCGGCG 1720130 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517 || ||||||| || | || | || || | |||||||||| | ||| Sbjct 1720131 AAAGCGACGAGGCGGATACCGAAGGAAGAACGG---TCGTCGTTGATCCACCGGAGAGCC 1720187 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 |||| ||||| | || |||| | || |||| |||| ||||| || || | Sbjct 1720188 CACTGCGCCTTGCGCGCGACACAGGGGATGGTCTCGACGGCGTTGAAGAGATGCTCGCGC 1720247 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 ||| | | || || ||||||||||||||| || ||||||||||| ||||||||||| Sbjct 1720248 TCGGCGGCCTCGCGGATGTAGGTGTCGATGAGAAGGGAGTAGGTCTCGGAGTGGATGTTC 1720307 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 || || ||||||||| || || |||||| Sbjct 1720308 TCCATCATGATCTGGAAACCGTAGAAGCAG 1720337 Score = 138 bits (152), Expect = 2e-26 Identities = 143/184 (78%), Gaps = 10/184 (5%) Strand=Plus/Plus Query 793916 CACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAA 793975 ||| ||| ||| || |||||||||||||||| ||||||||||| ||||| | ||| Sbjct 1719666 CACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAA 1719725 Query 793976 CGGGTTGGCCGTCAGGTAGT---GCTTCTCGCACCCGA--GCGACGCAAGCAGGCGGTCG 794030 |||||| ||||| || || ||||||| |||| |||||| |||||||||||| Sbjct 1719726 CGGGTT---CGTCACGTTGTACACCTTCTCGTTGCCGAGGGCGACG--AGCAGGCGGTCG 1719780 Query 794031 GCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGC 794090 |||||||| || |||||||||||||| || | | ||||||||| ||||| |||||| Sbjct 1719781 GCGACGAACTCGATGTACTGGCACATAAGCGTCGAGTTCATGCCAATGAGGCTGACGGGC 1719840 Query 794091 AGCG 794094 |||| Sbjct 1719841 AGCG 1719844 Score = 104 bits (114), Expect = 4e-16 Identities = 154/214 (72%), Gaps = 11/214 (5%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 |||||||| ||||||||||| ||| || || |||||||| ||||| ||| Sbjct 1720341 GCCTCGGGGACTTGGACCTCGCCAGAGAAACGCTCGAGGAGGTTCTCGTTGACGATACCG 1720400 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-G 796268 ||| ||||||||| |||||||||||||| ||| ||||| ||||| | |||| | | | Sbjct 1720401 TCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGGCGCTCATTGTCGTTCATG 1720460 Query 796269 CGAGAC--CCAGTGGACCGTGTCGG--CGCCG--AGGTCGACCTCCTCGGCGGTCCAAAA 796322 || | ||||| |||| || | || || || | ||||||||| ||||| || Sbjct 1720461 CGGTTCTGCCAGT----CGTGAAGGTCCTTCGACAGATCCATCTCCTCGGCAGTCCAGAA 1720516 Query 796323 GGAGGCCTCGGCCTTTTTGTACATCTCCCATATC 796356 || ||||| ||||| |||||||| | ||| ||| Sbjct 1720517 CGACGCCTCAGCCTTCTTGTACATTTGCCAGATC 1720550 >seq1 Length=3010126 Score = 161 bits (178), Expect = 2e-33 Identities = 237/331 (72%), Gaps = 11/331 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||||||||||||||| | |||||| ||| ||| || ||||| || ||||||||| Sbjct 2094655 CCTTCGTCGCGACTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATAAGCCCGCGCTTC 2094596 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| ||||| || ||| || ||||| || || || || || ||||| || Sbjct 2094595 TTCAGCCAGAAGATAGCGGCGAAGGACCCAGAGAAGAATATCCCTTCCACAGCGGCGAAC 2094536 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCGCC 794517 | ||||| || || || || || | | | ||||| | |||| | | |||| Sbjct 2094535 GCCACGAGTCGTTCCGCGAACGT--CGATGA----TTTGTCAGAGTTCCATCTAAGCGCC 2094482 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC-GCGAAAGAGGTGGTCCTT 794576 || || ||||| | | | | || | || |||||||| ||||| ||||||||| Sbjct 2094481 CAGTCCGCCTTGCGCTTGATGCACGGAATTGTCTCGATGGCAGCGAA-GAGGTGGTCTCG 2094423 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 ||| |||||||||| ||||||||||||||| || |||||||| || ||||| ||||| Sbjct 2094422 CTCCTGAGGGTCCTTGATGTAGGTGTCGATGAGTAGGGAGTAGGTTTCCGAGTGAATGTT 2094363 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 || || ||||||||||| || |||||| Sbjct 2094362 CTCCATCATTATCTGGAAGCCGTAGAAGCAG 2094332 Score = 102 bits (112), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 793899 GCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 793958 || ||||| ||||| || ||| |||||| || |||||||| || | ||||||||| Sbjct 2095023 GCTTTGGCGTACTCCGAAACCCGCTTCTCGAAGAAATTGGTCTTCCCTTGCAGCGAGATC 2094964 Query 793959 AACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCA 794018 | ||||| | ||| ||||||| | |||| ||| || || || | | | Sbjct 2094963 ATATCCATGAAGTCGAAGGGGTTGGTAGCATTGTAGATCTTGTCCTGTCCTAG-GCTGTA 2094905 Query 794019 -AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGAT 794077 | ||| ||||||||||||||||| ||||| || | ||||||||||||||||||||| || Sbjct 2094904 TAACAGCCGGTCGGCGACGAATTCTATGTATTGTCGCATGAGGGCGGCGTTCATGCCAAT 2094845 Query 794078 GAGCGCCACGGGCAG 794092 || | ||||| || Sbjct 2094844 TAGGGAGACGGGAAG 2094830 >seq21 Length=547483 Score = 120 bits (132), Expect = 5e-21 Identities = 205/290 (71%), Gaps = 7/290 (2%) Strand=Plus/Minus Query 794380 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGG-CACAGAAACTGCCCGAGAAAAA 794438 || ||||| | || |||||||| |||||||||||| | || || ||||||||||| || Sbjct 165009 CCAGGCATCAACCCCCGCTTCTTCAGCCAAAAGATGCTCGCA-AAGCTGCCCGAGAAGAA 164951 Query 794439 GATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTT 794498 || ||||| || || | || ||| |||||| ||||| | | || || | Sbjct 164950 AATCCCCTCCACCGCCGAGAACGCGATGAGCCGTATCGCAAAGCT--CGAGCGCCGATCC 164893 Query 794499 GTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 | |||||| || ||||||||| ||||| || | ||| | || | || |||| ||| Sbjct 164892 GC-GATCCAGCGCAGCGCCCACTCCGCCTTCTTGCGCACGCACGGGATGGTCTCGACGGC 164834 Query 794559 GCGAAAGAGGTG-GTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGT 794617 | | |||| || | || | | ||||| || ||| |||||||||||||| |||| Sbjct 164833 GTTGAGGAGGAACGTGCG-CTGGGCGGGGTCGCGGATGTACGTGTCGATGAGGAGGGAGT 164775 Query 794618 AGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 | ||||| ||||| | ||| || || |||||||||||| || |||||| Sbjct 164774 ACGTCTCCGAGTGCACGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAG 164725 Score = 107 bits (118), Expect = 3e-17 Identities = 156/217 (72%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTC-CTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208 |||||||| || | |||||| | || ||||||| | ||||||||| |||||||| Sbjct 164721 GCCTCGGGGACCTTGACCTCGCCGCA-GAAGCGGGTGAGCAGGTTCTCGTTGACGATGCC 164663 Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCG---CT 796265 |||| ||||||||| |||||||||||||| ||| ||||| ||||||| |||| | Sbjct 164662 GTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGCCGCTCGTTGTCGTTCAT 164603 Query 796266 GAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 | || |||||| | ||| | |||||| | ||| || |||||||| || || Sbjct 164602 GCGCTCTTCCCAGTCGTGGAGGTCCTTGGAGAGGTCCATCTCTTCTGCGGTCCAGAAAGA 164543 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362 || || | || |||||||| |||| ||| || || Sbjct 164542 CGCTTCTTCTTTCTTGTACATGGCCCAGATCTGTAGG 164506 Score = 96.9 bits (106), Expect = 5e-14 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 |||||| || ||||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct 165302 GCGACG--AGGAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGGTCGGCGTTCA 165245 Query 794071 TGCCGATGAGCGCCACGGGCAG 794092 | |||||||| | ||||| || Sbjct 165244 TACCGATGAGGGAGACGGGGAG 165223 >seq8 Length=1038518 Score = 120 bits (132), Expect = 5e-21 Identities = 175/239 (73%), Gaps = 10/239 (4%) Strand=Plus/Minus Query 2070010 TAGGGTCCCTCCTTTGCGGCCAGTTGTGCCGACGCCGTCGC-CGCCGCATGGTAGATCGT 2070068 || || ||||||| |||| || | | |||||| |||| ||| || ||||||||||| Sbjct 199849 TACGGGCCCTCCTCCTCGGCGAGGTCAGAGGACGCC-TCGCACGCTGCGTGGTAGATCGT 199791 Query 2070069 CTCAAAGATGGTGC-GGTTGAGGCGACGCGCGCC---GGCGCTCTCCCACGGCAGGTCCA 2070124 ||| ||||| ||| ||| || |||||||| |||| || |||||| | || Sbjct 199790 CTCGAAGAT-CTGCTTGTTCAG--CTCGCGCGCCTCGGGCG-AGTCGAACGGCATGCGCA 199735 Query 2070125 TCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGT 2070184 | ||| |||||||| |||||||| || |||| || || || |||||||||| || Sbjct 199734 GCGCCATAAAGGCGTCGGCGAGGCCCTGGACACCGAGACCAATGGGGCGGTGGCGCATGT 199675 Query 2070185 TCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 ||||| ||| |||||||| |||||||||| ||||| |||||| | ||| |||||| Sbjct 199674 TCGAGCGCCTCGCCTCGGGGACCGGGTAGTAGTTGACGTCGATGATCTTGTTCAGGTTG 199616 Score = 111 bits (122), Expect = 2e-18 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| ||| |||| || || ||||| || || | ||||||||||||||||||||| ||| Sbjct 199091 TCCAAAGGGCGTAGAACAGGTCGCGGGCACGCTGCTCCTCCTTGCCGTGGTTCTTCCTCA 199032 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 |||||| | |||| || ||||| |||||||||||| |||||| ||||| || ||| Sbjct 199031 AGTCGAGGAACTCGAAGACGTCGGGGTGCCACGGCTCGAGGTAGATAGCAAACGCCCCCG 198972 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 198971 GACGCTTGTTGCCACC 198956 Score = 87.8 bits (96), Expect = 3e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 2073658 CCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCC 2073717 ||||| ||||| || | ||| ||| | ||||||| || || || |||||||||||| Sbjct 198790 CCGATACCGCCAGCAGTCTTACTGATCATAGCGCACTGCTTGAGGGTGTCGTAGATGCCC 198731 Query 2073718 TCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTG 2073777 || ||||||||| ||||||| | || |||||||| |||||||| | | || Sbjct 198730 TCTATCGAGTCGTCCTTCATCGAGACGAGGAAGCACGAGCTCATTTGCGGGTGAGGGGTA 198671 Query 2073778 CCGGCATTGAAGAGCGTGGGCGTCGC 2073803 ||||| ||||| || ||||| | ||| Sbjct 198670 CCGGCGTTGAACAGGGTGGGTGACGC 198645 >seq14 Length=735368 Score = 109 bits (120), Expect = 9e-18 Identities = 193/277 (70%), Gaps = 7/277 (3%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 || ||||| ||| | ||| |||| |||||||||| || | |||||| || ||| Sbjct 89644 TCGATCTTCGAGTTCGGGTCGGAGGCGGACATCTTGCCGCCC---GCGAGGCCGGGGACC 89588 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGT-GGTCGCGCGC 2411504 | || ||| | ||||| ||||||| |||||| ||| || |||| || | || || Sbjct 89587 ATCGCGTTCATGAGGTGCGCGCGCTTGGCGTAGCCGAGCTTGGGGAGGTAGGCCTCG-GC 89529 Query 2411505 AAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTG 2411564 |||| ||||| |||||||||||| ||||| || ||| |||| | |||||| ||| Sbjct 89528 GAAGGTGAAGATTTTGCGCTGGTCGACGCCGCCGAATTGGAAGTCGCAGCCGAGGTACTG 89469 Query 2411565 CTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTGCGGTCCAT 2411624 ||||||||| || || | | ||||||| || | |||| | ||| | | || Sbjct 89468 CTCGTCGAGCGCTTGGAGGCCGGGGTAGAGCAGCCCGGAGAGCAGGGGGCTCTCGACCTG 89409 Query 2411625 CTTGACCACCTGGGCGGCGGCCTTTTGCGC--CGTGC 2411659 ||| || || | |||| ||||||| | ||| ||||| Sbjct 89408 CTTCACGACTTCGGCGCCGGCCTTCTTCGCATCGTGC 89372 >seq2 Length=2907307 Score = 102 bits (112), Expect = 1e-15 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||||||| |||| || |||| || ||||||||||||||||||| ||| | ||||| Sbjct 1587103 GCCTCGGTGGCGATCCGCTCGAAGATATCGTTGACAAACGAGTTCAGGATGGCCATCGCC 1587044 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||||| ||| ||||||||| |||||||| || || Sbjct 1587043 TTGTTCGAGATACCCGTGTCGGGGTGGACCTGCTTAAGGAC 1587003 Score = 96.9 bits (106), Expect = 5e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||||||| |||| || || | || ||||||||||||||||||| ||| | ||||| Sbjct 1561230 GCCTCGGTGGCGATCCGCTCAAAGATATCGTTGACAAACGAGTTCAAGATGGCCATCGCC 1561289 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||||| ||| ||||||||| |||||||| || || Sbjct 1561290 TTGTTCGAGATACCCGTGTCGGGGTGGACCTGCTTAAGGAC 1561330 >seq5 Length=1587088 Score = 96.9 bits (106), Expect = 5e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 ||||| ||| |||| || |||| || |||||||| || ||||||| ||| | ||||| Sbjct 566761 GCCTCAGTGGCGATACGCTCGAAGATATCGTTGACGAAGGAGTTCAGGATGGCCATCGCC 566702 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||||| ||| ||| ||||| |||||||||||||| Sbjct 566701 TTGTTGGAGATACCCGTGTCAGGGTGGACCTGCTTGAGCAC 566661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916221933850970