Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq7 127 1e-24 seq6 113 3e-20 seq2 113 3e-20 >seq7 Length=1356190 Score = 127 bits (140), Expect = 1e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || | ||||| |||| || || ||||| || || || Sbjct 309810 CTCCTTCTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCAAGCTGCTTGCCAGCAAA 309869 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| |||| | ||||||||||| | || || |||||| Sbjct 309870 GATAAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTGACGTT 309929 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || | ||| || |||| ||| |||||||| |||||||||||||| || Sbjct 309930 GTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTAAC 309989 Query 34966 AAAGATCTGCATG 34978 |||||||||||| Sbjct 309990 GAAGATCTGCATG 310002 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| ||||| || || | || |||| Sbjct 309509 AGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGACCATCC 309568 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 309569 TCCAGCTGCTTCCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 309628 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || || |||||| || | ||| |||||| Sbjct 309629 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCGAGGGTGATGGTC 309688 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || ||||||||||| Sbjct 309689 TTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 309720 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| ||||||||| ||||| || ||||| || |||| | || Sbjct 309281 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACCGTCC 309340 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || |||||||| |||| | ||||||||||| Sbjct 309341 TCGAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 309400 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| ||| | |||||| || | ||| || Sbjct 309401 TGAATCTTCGCCTTCAC--AT--TGTCGATGGTGTCAGATGACTCGACCTCCAGGGTGAT 309456 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| |||||||||||||| || |||||||||||| Sbjct 309457 CGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 309493 Score = 114 bits (126), Expect = 8e-21 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||||||||| ||||| || ||| |||| | || ||||| Sbjct 309059 AGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCAGC 309118 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| |||||||||||||| || |||||||| | || | |||||||| || | || Sbjct 309119 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTATCCTGGATC 309178 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || |||||| | |||| || || ||| || || | || || ||||| || Sbjct 309179 TTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCAACCTCGAGCGTGATCGTCTTGCCG 309238 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| || ||||| ||||| Sbjct 309239 GTCAACGTCTTGACGAAGATTTGCAT 309264 >seq6 Length=1546939 Score = 113 bits (124), Expect = 3e-20 Identities = 88/105 (84%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||| | ||||||||||||||| ||||| |||||||| ||| |||| |||| Sbjct 1352824 CAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATC 1352765 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || || ||||| |||||||||||||| || |||||||| |||| Sbjct 1352764 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGG 1352720 >seq2 Length=2907307 Score = 113 bits (124), Expect = 3e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| || ||||| ||| | || | || || || ||||| || ||||| Sbjct 2173205 CTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCGTCCTCAAGCTGCTTGCCCGCGAA 2173146 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || |||||||| |||| | ||||||||||| | || || |||||| Sbjct 2173145 GATAAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 2173086 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | || || |||||| || | || || ||||| |||||||| ||||| || Sbjct 2173085 GTCGATGGTGTCGGAGGACTCGACCTCGAGCGTGATCGTCTTCCCCGTGAGCGTCTTCAC 2173026 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 2173025 GAAGATCTGCAT 2173014 Score = 93.3 bits (102), Expect = 3e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||||||||| |||||||| || ||||| |||| Sbjct 2172997 AGCACGAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTGCGCCCATCC 2172938 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || || ||||| ||||||||||| || || |||||||| |||| Sbjct 2172937 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGCGG 2172894 Score = 89.7 bits (98), Expect = 3e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||||||||||||||| ||||| || || |||| | || Sbjct 2173504 AGGACCAAGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAAAGCGTGCGACCGTCC 2173445 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 |||| ||||| |||||||||||||| || |||||||| |||| Sbjct 2173444 TCCAACTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGG 2173401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691887042370