Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq8 226 3e-54 seq3 138 1e-27 seq7 131 2e-25 seq21 123 2e-23 seq2 123 2e-23 seq11 84.2 2e-11 >seq8 Length=1038518 Score = 226 bits (250), Expect = 3e-54 Identities = 405/585 (69%), Gaps = 10/585 (2%) Strand=Plus/Minus Query 148308 CTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGC 148367 |||||| |||| ||||| |||| ||||| ||||||||||| |||| ||||| ||| Sbjct 200056 CTCGTATACGGCTCAAAGCACTCATTGTTCCCCAAAATCTGACTCGTCGACGCCGTCGGC 199997 Query 148368 ATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC-TTCAGAGC 148426 || ||| || ||||||| || |||| || || | | | ||| |||| | Sbjct 199996 ATCGGCGCAACAAGCAGCGCATTCCGCATCCC-CGTCCGCGCAATCTTCGCCTTCAACGA 199938 Query 148427 CGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCG 148486 |||||||||||| || | ||| |||||| ||||| ||| ||||||| ||| | Sbjct 199937 CGCCCAGTCCCACAGATCTGTCGGCGTCACGCCCCACAGGTCAAACTGCAGCTGGCCCTG 199878 Query 148487 GCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCT 148546 ||| || ||||||||||| ||| |||||| || | | || | || || || || Sbjct 199877 GCTCGCCGGGCTGCCCTCCCACGTCTCGTACGGGCCCTCCTCCTCGGCGAGGTCAGAGGA 199818 Query 148547 CGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA---GCGCCGC 148603 ||||||| ||| ||| ||| ||||||||| || ||| |||| ||| ||||| | Sbjct 199817 CGCCTCGCACGCTGCGTGGTAGATCGTCTCGAAGATCTGCTTGTTCAGCTCGCGCGCCTC 199758 Query 148604 CGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCC 148663 | | | ||| ||||||| |||||| || ||| |||||||| |||||||| || || Sbjct 199757 GGGCGAG---TCGAACGGCATGCGCAGCGCCATAAAGGCGTCGGCGAGGCCCTGGACACC 199701 Query 148664 CACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGT 148722 | |||||||| ||||| ||||| ||| | | ||| ||| | | ||| |||| || Sbjct 199700 GAGACCAATGGGGCGGTGGCGCATGTTCGAGCGCCTCGC-CTCGGGGACCGGGTAGTAGT 199642 Query 148723 TGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATT 148782 || |||||||||||||| || ||||| |||||||| || | | ||||| | Sbjct 199641 TGACGTCGATGATCTTGTTCAGGTTGCGAGTGACCACCTTCGTGACGTCGTGCAGCTTCT 199582 Query 148783 CAAAATCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACA 148842 || |||||| | | || |||| | | || |||| ||||| || ||||| | Sbjct 199581 GGAAGTCGTACACGCCGTCGCGGATGAAGGTGGGCAGCGCGAGGGAGGCCAGGTTGCAGA 199522 Query 148843 CGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACA 148887 | || |||||||| || || |||||| | |||||| | ||||| Sbjct 199521 CAGCGGTCTCATCGGGAGCAGAGTACTCGATGATCTCCGTGCACA 199477 Score = 107 bits (118), Expect = 2e-18 Identities = 191/276 (69%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 149406 TTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAG 149464 ||||| | ||||| ||||| ||||| || || ||| ||| ||||| | ||| Sbjct 198805 TTGTGGATGTTGAGACCGATACCGCCAGCAGT-CTTACTGATCATAGCGCACTGCTTGAG 198747 Query 149465 CGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACAT 149524 || |||||||||||| || |||| |||||| | | || |||||||||| ||| Sbjct 198746 GGTGTCGTAGATGCCCTCTATCGAGTCGTCCTTCATCGAGACGAGGAAGCACGAGCTCAT 198687 Query 149525 TTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTG 149584 |||||| | | || ||||| ||||| |||||| || || || || || | Sbjct 198686 TTGCGGGTGAGGGGTACCGGCGTTGAACAGGGTGGGTGACGCATGGGTGAAGTAGCGGTC 198627 Query 149585 GCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644 ||| | | ||| | |||||| ||||| || |||| |||||| |||||||| | || Sbjct 198626 CGACATAAGGTTGTAGGTCTCGAGAACGCGCTCGATGTTATCGCCGTGGATGCCCACTGC 198567 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCAC 149680 ||||||||| | ||| || || || ||||| || || Sbjct 198566 GACGCGCATGATCATGTGTTGAGGGCGCTCAGCGAC 198531 >seq3 Length=1901115 Score = 138 bits (152), Expect = 1e-27 Identities = 354/526 (67%), Gaps = 20/526 (4%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| |||||||| ||||||| ||||||||||| | || ||||||||| || || Sbjct 1719989 CAGGCAGGCAAAGTCGGTGTGCATCCCCTCGTCGCGAGTGATGAGCTCGTTGGAGAAGGT 1720048 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || |||||||||| || | |||||| |||| ||| |||||||||||| || || Sbjct 1720049 GAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGCTGGCAAAGCTGCCGGAGAA 1720108 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCG--CCGTCTTG 120816 ||| | ||||| ||| ||| || ||||| | ||| | || | | | ||| | Sbjct 1720109 GAAGATACCCTCGACGGCGGCGAAAGCGACGAGGCGGATACCGAAGGAAGAACGGTC--G 1720166 Query 120817 CTGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGC-ACGCACGGCATCCGCTCGAA 120875 || ||||||| | ||||||| ||| || |||| || || || || ||||| Sbjct 1720167 TCGTTGATCCACCGGAGAGCCCACTGCGCC-TTGCGCGCGACACAGGGGATGGTCTCGAC 1720225 Query 120876 CGCGTTCAGCAGCATG-TCGCGCTCGCCCTCCTC-CGCAATCAGCTGATGGATGAGCAGA 120933 ||||| | || ||| ||||||||| | |||| || | || || | |||||| || Sbjct 1720226 GGCGTTGAAGAG-ATGCTCGCGCTCGGCGGCCTCGCGGATGTAGGTG-TCGATGAGAAGG 1720283 Query 120934 TTGTACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCC 120993 ||| | || | ||| | | ||| |||| | || ||| ||| | | ||| Sbjct 1720284 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGAGCC 1720343 Query 120994 TCCAG--CTCGGGCACCGCCCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGT 121051 || | || || | |||| | | | ||||| ||||| || ||||||| || Sbjct 1720344 TCGGGGACTTGGACCTCGCCAGAGAAACG--CTCGAGGAGGTTCTCGTTGACGATACCGT 1720401 Query 121052 CGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTC---GTCGTCCGTGA 121108 ||| |||||||||||| || || ||||| ||| ||||| ||||| ||||| | || Sbjct 1720402 CGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGGCGCTCATTGTCGTTCATGC 1720461 Query 121109 GCTTGTGCGCAAAATCGTCATAGTCCTTGGACAGGTCGACCTCCTC 121154 | || ||| | |||| | |||||| ||||| || | |||||| Sbjct 1720462 GGTTCTGC---CAGTCGTGAAGGTCCTTCGACAGATCCATCTCCTC 1720504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 |||||| || || || |||||||| ||||| || ||||||| | ||| || ||| Sbjct 1719654 CTTGTAGTCCGACACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTC 1719713 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||||||||| || |||| | ||| | ||| | |||||||| Sbjct 1719714 CATGAAGTCGAACGGGTTCGTCACGTTGTACACCTTCTCGTTGCCGAGGGCGACGAGCAG 1719773 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCC 120521 ||||| || || ||||| ||||||| |||||| | || ||||||||| Sbjct 1719774 GCGGTCGGCGACGAACTCGATGTACTGGCACATAAGCGTCGAGTTCATGCC 1719824 >seq7 Length=1356190 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| ||| | ||| ||| | ||||| |||||||| | Sbjct 309523 GGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGACCA-TCCTCCAGCTGCTTCC 309581 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| ||||||||||| |||||||| |||||| || Sbjct 309582 CGGCGAAGATAAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCT 309641 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | || ||| || |||| ||||| ||| || ||||||| | Sbjct 309642 TCACGTTGTCGATCGTGTCTGAGGACTCGACCTCGAGGGTGATGGTCTTCCCGGTCAAGG 309701 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 309702 TCTTGACGAAGATCTGCAT 309720 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| ||| || |||| | ||||| ||||||||||| Sbjct 309805 GTCGACTCCTTCTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCAAGCTGCTTGCCA 309864 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || |||||||||||||| ||||| || |||||||| |||||| |||| Sbjct 309865 GCAAAGATAAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTG 309924 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | ||| || || | ||||| ||| ||||| || || || Sbjct 309925 ACGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTC 309984 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 309985 TTAACGAAGATCTGCATG 310002 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| || | ||| ||| |||||| |||||||||| Sbjct 309067 GGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACC-GTCCTCCAGCTGCTTGC 309125 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||||||||| ||||| ||||| || |||||| || Sbjct 309126 CGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTATCCTGGATCTTCGCCT 309185 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||| |||| || ||| || |||| |||| || |||||||||| | Sbjct 309186 TGACGTTGTCGATCGTATCGGAGGACTCAACCTCGAGCGTGATCGTCTTGCCGGTCAACG 309245 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 309246 TCTTGACGAAGATTTGCAT 309264 Score = 114 bits (126), Expect = 1e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || |||||||| | ||| ||| ||||||||||||||| | Sbjct 309295 GGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGACC-GTCCTCGAGCTGCTTCC 309353 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| || |||||||| |||||||| ||||| || Sbjct 309354 CAGCGAAGATGAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCT 309413 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | ||| || || | ||||| || ||||| || || | Sbjct 309414 TCACATTGTCGATGGTGTCAGATGACTCGACCTCCAGGGTGATCGTCTTGCCCGTGAGGG 309473 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 309474 TCTTGACGAAGATCTGCATG 309493 >seq21 Length=547483 Score = 123 bits (136), Expect = 2e-23 Identities = 313/468 (67%), Gaps = 6/468 (1%) Strand=Plus/Minus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 |||||| |||||||| || |||| |||||||||||||| || |||||||| ||||| Sbjct 165073 CAGGCAGGCAAAGTCGGTATGCATGCCCTCGTCGCGCGTGATGAGCTCGTTCGAGAACGT 165014 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || || ||||| | || | |||| | | || ||| |||||||||||||| || Sbjct 165013 CAACCCAGGCATCAACCCCCGCTTCTTCAGCCAAAAGATGCTCGCAAAGCTGCCCGAGAA 164954 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCG-CCGTCTTGC 120817 ||| | |||||||| | || |||| | || || || ||| || | | Sbjct 164953 GAAAATCCCCTCCACCGCCGAGAACGCGATGAGCCGTATCGCAAAGCTCGAGCGCCGATC 164894 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACG 120877 | ||||||| || |||||||| ||||| |||||||||||||| || ||||| | Sbjct 164893 CG-CGATCCAGCGCAGCGCCCACTCCGCCTTCTTGCGCACGCACGGGATGGTCTCGACGG 164835 Query 120878 CGTTCAGCAGCATGTCGCGCTCGCCCTCCTC-CGCAATCAGCTGATGGATGAGCAGATTG 120936 |||| || || | ||||| | | || || | | || | |||||| || | Sbjct 164834 CGTTGAGGAGGAACGTGCGCTGGGCGGGGTCGCGGATGTACGTG-TCGATGAGGAGGGAG 164776 Query 120937 TACATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCC 120996 ||| | |||| ||||||| ||| |||| | || | ||| ||| | ||||||| Sbjct 164775 TACGTCTCCGAGTGCACGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGCGCCTCG 164716 Query 120997 AGCTCGGGCACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGC 121055 | | ||| | |||| | | | || ||||| || ||||| | ||||| Sbjct 164715 GGGACCTTGACCTCGCCGCAG-AAGCGGGTGAGCAGGTTCTCGTTGACGATGCCGTCGGA 164657 Query 121056 GGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTC 121103 |||||||||||| || || ||||| ||| ||||| ||||||| ||| Sbjct 164656 GGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGCCGCTCGTTGTC 164609 >seq2 Length=2907307 Score = 123 bits (136), Expect = 2e-23 Identities = 152/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| ||||| ||||| || |||||||| | | | | ||| |||||| ||| Sbjct 2173217 ATGGAGGGTCGACTCCTTCTGGATGTTGTAATC--CGAAAGGGTACGGCCGTCCTCAAGC 2173160 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||||||| | || || ||||||||||| || |||||||| |||||||| ||| Sbjct 2173159 TGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATC 2173100 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | || | ||||||| || ||| || |||| |||| || || || Sbjct 2173099 TTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGCGTGATCGTCTTCCCC 2173040 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 2173039 GTGAGCGTCTTCACGAAGATCTGCAT 2173014 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || |||| ||| |||||||||||||||||| Sbjct 2172698 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACC-GTCCTCGAGCTGCTTGCC 2172640 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 ||| | || || |||||||||||||| ||||||| Sbjct 2172639 CGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGC 2172605 >seq11 Length=779764 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | |||| | ||||||||||||||||||| Sbjct 380625 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGCCCGTCCTCGAGCTGCTTGCCC 380566 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 || | ||||| |||||||||||||| ||||||| Sbjct 380565 GCAAAGATGAGACGCTGCTGGTCGGGCGGGATGC 380532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419410165200