Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_025431.1 Length=45718 Score E Sequences producing significant alignments: (Bits) Value seq24 113 1e-20 >seq24 Length=520643 Score = 113 bits (124), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 8/218 (4%) Strand=Plus/Minus Query 11635 TCTACTTCCCCCACAACCTCGACTTCCGTGGCCGAGCCTACCCGGTGCCGGATGTCCTGA 11694 ||||| ||||||||||||||||||||||| || || ||||| || || | | ||| Sbjct 511511 TCTACCAGCCCCACAACCTCGACTTCCGTGGTCGCGCATACCCCGTCCCCCCTCACTTGA 511452 Query 11695 ACCCGCAGGGCAGCGAC----CCCGTTAAGGCGCTTCTCAGGTTCGCCGAGGGGAAGCCT 11750 ||| ||| |||| |||| | ||| |||| |||||| ||| ||||||| Sbjct 511451 ACCATATAGGCGACGACTTGTCCCGC----GGGCTGCTCATGTTCGCGGAGAAGAAGCCT 511396 Query 11751 CTCGGGGCGGATGGCGCGCGCTGGCTCATGATCCACGGCGCGAACACGTTCGGCATCGAC 11810 ||||| | | ||| |||||||||| ||||||| ||| ||| || |||| | ||| Sbjct 511395 CTCGGCGAGCGCGGCTTCCGCTGGCTCAAGATCCACATCGCCAACTTGTACGGCTTTGAC 511336 Query 11811 AAGGTGTCCTTCACCGAGCGCGTCGAGTGGGTTCAGGA 11848 |||| |||||| |||||| || ||||||| |||| Sbjct 511335 AAGGCCTCCTTCGACGAGCGTGTGCAGTGGGTCGAGGA 511298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146175600756800