Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq8 120 4e-22 >seq8 Length=1038518 Score = 120 bits (132), Expect = 4e-22 Identities = 217/313 (69%), Gaps = 11/313 (4%) Strand=Plus/Minus Query 146787 CATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATC 146846 ||| || || || || ||||||| || ||||| | |||| || || | |||| || Sbjct 537348 CATAGGTATTGACGGATGCGGGTTATACCCCTCCACCACAAAGTCCTCGTACTTGAAGTC 537289 Query 146847 GTCTATGTCCTCCA---CCCGCCTCAAA-ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCC 146902 || |||||||| | || |||| |||| | ||| ||||| | || || | | Sbjct 537288 TTCGATGTCCTCGATGTCCTCCCTCCCCCATCTCAA-CTTCGGGAACGCGCGCGGCTCGC 537230 Query 146903 TGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAG-- 146960 |||||| || || || | |||||| |||| | ||||||||||||||||||| || Sbjct 537229 GCTGCAGCTGCATCTTTAGCGCCTCCACATGGTCGCGGTAGACGTGCGCGTCCCCTAGCT 537170 Query 146961 -GGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCA 147019 | || || || | | | | |||||| ||| |||| | ||| | ||||||| Sbjct 537169 GGATGATCAGCTCGTGCGCGTCCGT---GCCGGTGACGCGGGCGATCATATGCGTGAGCA 537113 Query 147020 GCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACA 147079 ||| |||| || ||||||||||| || || ||||||| |||| |||| | |||||||| Sbjct 537112 GCGCGTAGGACGCGATGTTGAAGGGCACACCGAGGCCCAGGTCCGCCGAGCGCTGGTACA 537053 Query 147080 GCTGGCACGAGAG 147092 |||||||||| Sbjct 537052 TGAGGCACGAGAG 537040 Score = 84.2 bits (92), Expect = 3e-11 Identities = 191/278 (69%), Gaps = 12/278 (4%) Strand=Plus/Minus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC-CCGCAGTCCACGTACCTGGCCCCAA 147289 |||||| || ||||||||||| |||| | ||||| ||| |||| || || | Sbjct 536811 CAGCTGATCGACGCCCTGGCCAGTATAGTCCGCGTCCGCA-TCCTTGTACTCTGCGCCGA 536753 Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG---TGCGAGA 147346 |||| | ||| ||||||||||| || || || ||||| || || ||| ||| || Sbjct 536752 AGTGTCGCCATTGGAAGCCGTATACGGGACCGAGGTCTCC---CTCTCTACGATGCCCGA 536696 Query 147347 AGCCCGCCCGCTT-GAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTG 147405 |||||| | ||| ||| ||||| || || | |||||||||| || | || Sbjct 536695 -GCCCGCGCCCTTCGAGGAACTCCTTCGATCCATTTCCGTCCCAGATCGTGAC-CTTTTT 536638 Query 147406 GCG-GAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAAC 147464 ||| ||||| | ||||||| ||| | || |||| ||||||||||| ||||| | | Sbjct 536637 GCGCGAGAGAACGGTAGAGTCGGTGCAACCGTGGATAAACCAGAGCAGTTCCTCTACTAT 536578 Query 147465 CCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 ||| | | | || || |||||| || | ||||||| Sbjct 536577 CCCGCGCAAGAATGTCCGCTTGGTAGTGATGAGGGGGA 536540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583486322472000