Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq7 123 3e-23 seq2 96.9 4e-15 seq6 82.4 8e-11 seq3 82.4 8e-11 >seq7 Length=1356190 Score = 123 bits (136), Expect = 3e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || || || ||||| |||||||||||||| | |||| || ||| || ||| Sbjct 309059 AGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGACCGTCCTCCAGC 309118 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || |||| |||||||| ||||| || ||||| || || || || || Sbjct 309119 TGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTATCCTGGATC 309178 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | || ||||| || || || ||||| || || || || ||| Sbjct 309179 TTCGCCTTGACGTTGTCGATCGTATCGGAGGACTCAACCTCGAGCGTGATCGTCTTGCCG 309238 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| |||||||| Sbjct 309239 GTCAACGTCTTGACGAAGATTTGCAT 309264 Score = 122 bits (134), Expect = 9e-23 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCG 134564 |||| || ||||| || ||||| |||||||||||||| | |||| ||| | || || Sbjct 309794 CGAGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGACAAC-GTGCGCCCATCCTCA 309852 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| || | ||||||||| |||||||| || || || || || || Sbjct 309853 AGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGG 309912 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | ||||| ||||| || || || || || ||||| || Sbjct 309913 ATCTTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTG 309972 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || |||||||| || ||||| Sbjct 309973 CCCGTGAGGGTCTTAACGAAGATCTGCAT 310001 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || || ||||| || |||||||||||| Sbjct 309494 CCACCACGGAGGCGAAGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 309553 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || ||||| || || || || || | |||||||| || || || Sbjct 309554 AGCGTACGACCATCCTCCAGCTGCTTCCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGG 309613 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | ||||| || || || || Sbjct 309614 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACC 309673 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || ||||| || || || ||||| || ||||| Sbjct 309674 TCGAGGGTGATGGTCTTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 309720 Score = 82.4 bits (90), Expect = 8e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || ||||| ||||| || ||||||||||| | ||| | Sbjct 310012 AGACGGAGCACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGG 310071 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 || |||||||| ||||| ||||| |||| |||||||| ||||| || |||| Sbjct 310072 CCATCTTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGAATGC 310126 >seq2 Length=2907307 Score = 96.9 bits (106), Expect = 4e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| ||||| || ||||| || |||||||||||| | ||| || ||| ||| Sbjct 2172710 ACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGACCGTCCTCG 2172651 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||||| ||||| ||||| |||| |||||||| |||||||| |||| Sbjct 2172650 AGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGC 2172605 >seq6 Length=1546939 Score = 82.4 bits (90), Expect = 8e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| |||||||| || ||| ||||| || ||||||||||| || |||| | Sbjct 1352829 AGACGCAGGACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 1352770 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 || |||||||| ||||| || || |||| |||||||| |||||||| |||| Sbjct 1352769 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGC 1352715 >seq3 Length=1901115 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 21718 AGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTG 21777 || || ||||| | |||||||| ||||||||||| | || | |||||| ||| ||| Sbjct 1719990 AGGCAGGCAAAGTCGGTGTGCATCCCCTCGTCGCGAGTGATGAGCTCGTTGGAGAAGGTG 1720049 Query 21778 AGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaa 21837 ||||||||||| | ||| || || || | | || || |||||||| ||||| || Sbjct 1720050 AGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGCTGGCAAAGCTGCCGGAGAAG 1720109 Query 21838 aaCACGCCCTCCACAATGGCGAACGCCACCATGCG 21872 || | ||||| || |||||| || || | ||| Sbjct 1720110 AAGATACCCTCGACGGCGGCGAAAGCGACGAGGCG 1720144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396946979600