Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01]
230 sequences; 39,005,850 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq7 129 2e-24
seq15 87.8 5e-12
>seq7
Length=1356190
Score = 129 bits (142), Expect = 2e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591
||||| || || ||||| || ||||| || || || || || || |||||||| |||||
Sbjct 309796 AGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCAAGC 309855
Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651
|| || ||||||||||| ||||| ||||| || || || || || || || ||||| ||
Sbjct 309856 TGCTTGCCAGCAAAGATAAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATC 309915
Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711
|| || || || || || || | || || | ||||| ||||| || | ||||| ||
Sbjct 309916 TTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCC 309975
Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || || || ||||||||
Sbjct 309976 GTGAGGGTCTTAACGAAGATCTGCAT 310001
>seq15
Length=713271
Score = 87.8 bits (96), Expect = 5e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||| | || || || | || || || || ||||| || | ||| ||||||||||| |||
Sbjct 113309 GCTGTCGGCATTGACCTGGGCACCACCTACTCTTGCGTCGGTGTCTGGCAAAATGACCGT 113250
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || || ||||| || || || |||||| | || || || || ||||| || || |||
Sbjct 113249 GTCGAGATCATTGCCAACGACCAGGGTAACCGCACGACCCCGTCCTACGTCGCCTTCACC 113190
Query 349319 GAAACTGAGCGTATGATTGGTGA 349341
|| |||||||| | | |||||
Sbjct 113189 GACTCTGAGCGTCTCGTCGGTGA 113167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515249934734690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |