Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7 129 2e-24 seq15 87.8 5e-12 >seq7 Length=1356190 Score = 129 bits (142), Expect = 2e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||| || || ||||| || ||||| || || || || || || |||||||| ||||| Sbjct 309796 AGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCAAGC 309855 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || ||||||||||| ||||| ||||| || || || || || || || ||||| || Sbjct 309856 TGCTTGCCAGCAAAGATAAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATC 309915 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || || || || || || | || || | ||||| ||||| || | ||||| || Sbjct 309916 TTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCC 309975 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || |||||||| Sbjct 309976 GTGAGGGTCTTAACGAAGATCTGCAT 310001 >seq15 Length=713271 Score = 87.8 bits (96), Expect = 5e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || || | || || || || ||||| || | ||| ||||||||||| ||| Sbjct 113309 GCTGTCGGCATTGACCTGGGCACCACCTACTCTTGCGTCGGTGTCTGGCAAAATGACCGT 113250 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || || || |||||| | || || || || ||||| || || ||| Sbjct 113249 GTCGAGATCATTGCCAACGACCAGGGTAACCGCACGACCCCGTCCTACGTCGCCTTCACC 113190 Query 349319 GAAACTGAGCGTATGATTGGTGA 349341 || |||||||| | | ||||| Sbjct 113189 GACTCTGAGCGTCTCGTCGGTGA 113167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515249934734690