Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 8e-15 >seq2 Length=2907307 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | |||||| || |||||| || ||||| ||||| ||||| || || Sbjct 2173231 AGACGGAGCACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGG 2173172 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || || || || || | ||||| ||||| ||||| | |||||| Sbjct 2173171 CCGTCCTCAAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCAGGCGGGATGCCCTCC 2173112 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || ||| | || ||||| | ||| || || | || Sbjct 2173111 TTGTC-CTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGCGT 2173053 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || | ||| ||||| || |||||||| Sbjct 2173052 GATCGTCTTCCCCGTGAGCGTCTTCACGAAGATCTGCAT 2173014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728717773590