Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01] 230 sequences; 39,005,850 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 >seq1 Length=3010126 Score = 127 bits (140), Expect = 2e-24 Identities = 277/415 (67%), Gaps = 0/415 (0%) Strand=Plus/Minus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| |||||||| | || || || ||||| || || || | || ||||| | || Sbjct 2094661 TGCATGCCTTCGTCGCGACTGATGAGCTCGTTGGAGAAGGTGAGACCAGGCATAAGCCCG 2094602 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||| || ||||| || |||||||| || |||||||| |||||||| ||||| || ||| Sbjct 2094601 CGCTTCTTCAGCCAGAAGATAGCGGCGAAGGACCCAGAGAAGAATATCCCTTCCACAGCG 2094542 Query 4683 GCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCC 4742 || ||||| || | ||| | |||||| | |||||| ||||| | | ||| Sbjct 2094541 GCGAACGCCACGAGTCGTTCCGCGAACGTCGATGATTTGTCAGAGTTCCATCTAAGCGCC 2094482 Query 4743 CAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTT 4802 |||| || || ||| | |||||||||||| | || || || | | | Sbjct 2094481 CAGTCCGCCTTGCGCTTGATGCACGGAATTGTCTCGATGGCAGCGAAGAGGTGGTCTCGC 2094422 Query 4803 TCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTT 4862 || ||||| | || || ||||| || |||||| || |||| || || || || Sbjct 2094421 TCCTGAGGGTCCTTGATGTAGGTGTCGATGAGTAGGGAGTAGGTTTCCGAGTGAATGTTC 2094362 Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922 || || ||||| || ||||| ||||| | || || | | ||||| ||||| || Sbjct 2094361 TCCATCATTATCTGGAAGCCGTAGAAGCAGCGCGCCTCCGCCGCCTGAACCTCGTTGGAA 2094302 Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCA 4977 || | || || | ||| ||||| || || || || ||| || || || |||| Sbjct 2094301 AAGCGCTCAACGAGGTTCTCGTTGACAATCCCATCGGAGGCGGCGAAGAAAGCCA 2094247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048402926590