Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Schizophyllum_20commune_20[genbank_20GCA_5F001599475.1_202016-03-01]
230 sequences; 39,005,850 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq7 134 3e-26
seq2 123 6e-23
>seq7
Length=1356190
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| || || || ||||| || |||||||||||||| | | ||| |
Sbjct 309274 GAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCG 309333
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || ||||| |||||||| || | ||||||||| | || ||| || ||
Sbjct 309334 ACCGTCCTCGAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCAGGCGGGATGCCCTC 309393
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || || ||| | || | | |||| || ||| || || || ||
Sbjct 309394 CTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTGTCAGATGACTCGACCTCCAGGGT 309453
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||||||||| ||||| ||||||| ||||||
Sbjct 309454 GATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 309492
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958
||||| || || ||||| || || |||||||| |||| || || | |||||| || ||
Sbjct 309796 AGATGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGACAACGTGCGCCCATCCTCAAGC 309855
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
|| || || |||||||| | ||||||||| | || ||| || ||||| || || ||
Sbjct 309856 TGCTTGCCAGCAAAGATAAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATC 309915
Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078
|| ||||| | || | | |||| || ||| || ||||| || || || ||||||
Sbjct 309916 TTCGCCTTGACGTTGTCGATGGTGTCCGACGACTCAACCTCAAGGGTGATGGTCTTGCCC 309975
Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||||| ||||||
Sbjct 309976 GTGAGGGTCTTAACGAAGATCTGCAT 310001
Score = 107 bits (118), Expect = 4e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || |||||||| || ||||||||||| |||| | || | |||||
Sbjct 309509 AGGACGAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGACCATCC 309568
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||||||||||||||||| | ||||||||| | | ||| || ||||| ||
Sbjct 309569 TCCAGCTGCTTCCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 309628
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || | || | ||||||| ||| || || || || || ||
Sbjct 309629 TGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCGAGGGTGATGGTC 309688
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || | ||||| ||||||| ||||||
Sbjct 309689 TTCCCGGTCAAGGTCTTGACGAAGATCTGCAT 309720
>seq2
Length=2907307
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || ||||| || || ||||| || |||||||||||||| | | || | || ||
Sbjct 2173226 GAGCACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCGTC 2173167
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || ||||||||||| | ||||||||| | || ||| || ||||| ||
Sbjct 2173166 CTCAAGCTGCTTGCCCGCGAAGATAAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 2173107
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
||||| || ||||| | || | | |||| || ||| || || || || || ||
Sbjct 2173106 CTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGCGTGATCGT 2173047
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| ||||||||||||| ||||||
Sbjct 2173046 CTTCCCCGTGAGCGTCTTCACGAAGATCTGCAT 2173014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153817399834330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |