Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq57 87.8 4e-12 >seq57 Length=175691 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 ||||| || ||||| || || || || || || || || || || || ||||| ||| Sbjct 69040 CCTCCTGCCGTCTTCGAAATCATAGCACACTGTTTGAGTGTGTCGTAGATCCCCTCGATG 68981 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911 || || || | | || | |||||||||||| | ||||| || ||||| | Sbjct 68980 CTGTCGTCCTTCATGCATACGAGGAAGCACGAGCTCATCTGGGGGTTGGGAGTTCCCGCA 68921 Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971 || |||| || || || ||||| || || || |||||||||| ||| || ||| Sbjct 68920 TTGAACATCGTAGGACTTGCGTGGGTGAAGAAGCGCTCGGACATGAGATTATAGGTCTCA 68861 Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031 || | || |||||| || ||||| || | ||| |||||||||| ||||| ||| Sbjct 68860 ATAGCTCGTTCGATGTCGCGGCCATGAATACCAATAGCGACACGCATAAGCATGTGCTGG 68801 Query 95032 GGGCGCTC 95039 || | ||| Sbjct 68800 GGTCTCTC 68793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989567631352905