Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq277 93.3 4e-14 >seq277 Length=43962 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922 |||| | |||||| ||||| || | || || || | || || | ||||| | Sbjct 18612 AAAAGGAGACACGCGAAATCCGTGTGCATCCCTTCGTCGCGGCTGATCAACTCGTTACTA 18553 Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982 || || | ||||||||||||||| || || |||| ||| || || || ||||| || || Sbjct 18552 AAGGTGAGTCCTGGCATCAATCCCCGCTTCTTTAGCCAGAAGATGGCCGCAAAGGAACCC 18493 Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042 || || || ||||| ||||| ||||| || || | || |||||||| ||||| | | Sbjct 18492 GAGAAAAAGATTCCTTCAACCGCAGCGAAAGCCACCAAACGTTCTCCGAACGACGACCTG 18433 Query 14043 TTGTTCGATATCCA 14056 ||| |||||||| Sbjct 18432 GTGTCAGATATCCA 18419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479720258389400