Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq250 84.2 2e-11 >seq250 Length=49273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | || || || || || ||||| || ||||||||| |||||||| |||| Sbjct 5831 ACCACCACGCAAACGGAGGACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCTGA 5772 Query 33960 CA-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | | || || |||| ||||||||||||||||| || |||| |||||||||||| Sbjct 5771 GAGACTG-CGACCGTCCTCCAATTGCTTGCCGGCGAAGATCAAGCGCTGCTGATC 5718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397056152595382