Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq57 89.7 6e-13 >seq57 Length=175691 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 9/227 (4%) Strand=Plus/Minus Query 106799 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 106858 |||||||| || ||||| || | | || ||||||| | ||||| ||||| | || Sbjct 69366 AAAAGGTCAGGGATCCATAGCGCGTAGAAAAGATCTCGAGCGCGAGCTTCTTCTTTTCCA 69307 Query 106859 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 106918 ||||| || | ||||||||||| | || || |||||||||||||| | |||| | Sbjct 69306 TGGTTCTTACGAAGGTCAAGGAACTCGAAGACGTCGGCGTGCCATGGCTCCATGTAGATT 69247 Query 106919 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 106972 |||| || ||| | ||||| ||| |||| | || || || || || || | Sbjct 69246 GCGAAAGCTCC---TGGACGCTTATTACCACCTTGGTCGACGTAACGAGCGGTCGCATCG 69190 Query 106973 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCC 107019 | | |||||||| || | ||| || | ||| | |||||| ||||| Sbjct 69189 TAGGCTCGAAGCATCGGCACAATGCCGTTTGAATAACCATTGGTCCC 69143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589971279184840