Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq250 93.3 3e-13 >seq250 Length=49273 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||| || || || ||| || || |||||| |||| || | Sbjct 6053 ACGAAGACGAAGGACAAGGTGGAGCGTCGATTCCTTCTGAATATTATAGTCAGAAAGGCT 5994 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||| || || ||||| ||||| || || ||||| || || || ||||||||||| Sbjct 5993 TCGTCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGAATTCC 5934 Query 480671 TTCCTTGTCTTGAATCTTT 480689 ||||||||| || |||||| Sbjct 5933 TTCCTTGTCCTGGATCTTT 5915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268123822746068