Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq21 89.7 4e-12 >seq21 Length=238599 Score = 89.7 bits (98), Expect = 4e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 282343 ACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGC 282402 ||||||||| | ||| || ||||| || || || || | | ||||| | |||||||| Sbjct 223908 ACCATACGCCAGAGCGGCTGCAGTCGGCTCGTTGATGACGCGTAAAACCTCCAGACCAGC 223967 Query 282403 AATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 282462 ||| |||||||| ||||| ||||| | ||||| ||| || ||||||||||| || || Sbjct 223968 TATTTGACCTGCATCCTTAGTCGCTTGCCGTTGTGCATCATTGAAATATGCAGGGACGGT 224027 Query 282463 AATAACGGC 282471 | ||| || Sbjct 224028 CACAACAGC 224036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740567017355766