Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq277 93.3 4e-14 >seq277 Length=43962 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 50283 GAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCC 50342 |||||||| ||||| || || |||||||| | ||||| || ||| |||||| ||| Sbjct 18449 GAACGTTTGGTGGCTTTCGCTGCGGTTGAAGGAATCTTTTTCTCGGGTTCCTTTGCGGCC 18508 Query 50343 ATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATT 50402 || || | | || | || | ||||| || ||||| ||||| ||||||||||| Sbjct 18509 ATCTTCTGGCTAAAGAAGCGGGGATTGATGCCAGGACTCACCTTTAGTAACGAGTTGATC 18568 Query 50403 TCGCGCGACGAAGGAATGCACACAGACTTTGCGTGT 50438 ||||||||||| |||||||| || || |||||| Sbjct 18569 AGCCGCGACGAAGGGATGCACACGGATTTCGCGTGT 18604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488536116121200