Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq57 111 1e-19 >seq57 Length=175691 Score = 111 bits (122), Expect = 1e-19 Identities = 210/309 (68%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 148110 GTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGG 148169 |||||| || ||||||||||||| || | || | | || ||||| | ||| || || Sbjct 68996 GTAGATCCCCTCGATGCTGTCGTCCTTCATGCATACGAGGAAGCACGAGCTCATCTGGGG 68937 Query 148170 AATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCAT 148229 | | |||||||| ||| | || ||||| ||||| || || || | ||| Sbjct 68936 GTTGGGAGTTCCCGCATTGAACATCGTAGGACTTGCGTGGGTGAAGAAGCGCTCGGACAT 68877 Query 148230 CATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCG 148289 | ||| ||||||||||| |||||||||| ||| ||||| || | ||||| || Sbjct 68876 GAGATTATAGGTCTCAATAGCTCGTTCGATGTCGCGGCCATGAATACCAATAGCGACACG 68817 Query 148290 CATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATT 148349 ||| ||||||||||| |||| || || | || ||| ||||| | ||| || | Sbjct 68816 CATAAGCATGTGCTGGGGTCTCTCCGCGATTTTGCCGTTAATCTTCAAAAGGTAGGAACG 68757 Query 148350 TTCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGC 148409 ||||| || ||| |||| ||||| | ||||| || || | ||||| ||| || | Sbjct 68756 CTCGAGAGTCTTGAAACCGAAGTATTGGTAATGGAAGTCACGGTCGTAGATGATCGCGGA 68697 Query 148410 ATCTAGTGT 148418 ||| || || Sbjct 68696 ATCGAGAGT 68688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476603508686760