Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq250 114 1e-20 >seq250 Length=49273 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||| || || || | | | |||| | || || |||||||| || || || Sbjct 6022 TCCTTCTGAATATTATAGTCAGAAAGGCTTCGTCCATCCTCGAGCTGCTTGCCAGCGAAG 5963 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | ||||| | ||||||||| ||||||| ||||| ||| Sbjct 5962 ATGAGACGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTGGATCTTTGACTTCA-CGTT 5904 Query 35666 G-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||||| ||| || ||||||| |||||||| || || ||||| || || || Sbjct 5903 GTCAATCGTGTCCGACGACTCGACCTCCAAAGTGATCGTCTTCCCTGTCAACGTCTTGAC 5844 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 5843 AAAGATCTGCAT 5832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450786325318280