Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 >seq3 Length=549351 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||||||| |||||| || || ||| || || |||||||| || |||||| Sbjct 261396 CCCTCGTCACGGCTGATGAGCTCGTTGCTGAAAGTGAGGCCAGGCATGAGCCCTCGCTTC 261455 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || ||| || || ||||||||||| || || || || || ||| Sbjct 261456 TTGAGCCAGAAGATGGCAGCGAAGGATCCAGAGAAGAAAATGCCTTCGACGGCGGCAAAC 261515 Query 130154 GCAAAGAGACGCTCAGCAAAGGA 130176 || | ||||||||| || ||||| Sbjct 261516 GCGATGAGACGCTCGGCGAAGGA 261538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618425220001960