Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizopora_20paradoxa_20[genbank_20GCA_5F001020605.1_202015-06-05] 1,291 sequences; 44,406,206 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1111 111 2e-19 >seq1111 Length=1418 Score = 111 bits (122), Expect = 2e-19 Identities = 217/318 (68%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || || ||||| ||| | || ||||| | ||| || | |||||| ||| || | | Sbjct 377 CAAGCGAAATCTGTATGCATTCCCTCATCTCGACTGATGAGTTCATTGCTAAACGTGAGT 436 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 |||||||| | ||| |||||||| | ||| || || || || || || || || |||||| Sbjct 437 CCTGGCATAAGTCCCCGTTTTTTTAGCCAGAAGATGGCTGCGAAAGACCCCGAGAAGAAA 496 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || ||||||||||| || || |||||| | | || || | | | || ||| Sbjct 497 ATTCCTTCGACAGCCGCAAACGCGACGAGACGTTCAGCGAAAGTCGATTCCTCGTCCGAA 556 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 |||||| || ||| | |||||| ||| || || | ||| || || ||| Sbjct 557 ATCCATCGAAGTGCCCATTCAGCCTTTCTTTTAACGCATGATACTGTCTCTATAGCTGAG 616 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTA-TACAT 23807 || ||| | |||| ||| ||| ||||||| ||||| || || | | ||| | Sbjct 617 AATAGACGCGCCCGTTCTGTATTTTCTTGAATATATGCATCAAGGAG-AAGCGAGTACGT 675 Query 23808 TTCAGAATGAATATTTTC 23825 ||| ||||| |||||||| Sbjct 676 TTCCGAATGGATATTTTC 693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521479584487400