Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq16 183 3e-41 seq2 102 7e-17 >seq16 Length=695925 Score = 183 bits (202), Expect = 3e-41 Identities = 175/224 (78%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 || || || | ||| || |||||||| ||||| || |||||||| || || || |||||| Sbjct 74449 TCGACACGGCGCATGAACAGATCCGGAATCCACAGCGCGTAGAAGAGATCACGAGCGCGC 74390 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 |||||||| |||||| |||||| | || | |||||| |||||||| || |||||| Sbjct 74389 ACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGATAAAGTCGAACACGTCGGCGTGCCAC 74330 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||||||||| | ||| ||||| ||||||| ||| ||||| || || |||||||| || Sbjct 74329 GGCTCGAGGTAGATGGCGAACGCTCCCGGTCGCTTGTTGCCACCTTGGTCGACGTATCGA 74270 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || ||| || ||| ||| ||||| ||||||| |||||| || Sbjct 74269 GCGGTGGCGTCGTATGCTCGGAGCATGGGCACGATACCGTTCGA 74226 Score = 111 bits (122), Expect = 1e-19 Identities = 645/1026 (63%), Gaps = 22/1026 (2%) Strand=Plus/Minus Query 22108 GTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGT 22167 |||||| || ||||| |||||||| |||| || ||| || || || |||||||| || Sbjct 75764 GTCCACGGTGAACTGGATGGCGTTGACGGCGGGGCGGGTTCGGAGGTAGTACATGCCGGT 75705 Query 22168 CTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAA 22227 ||| || ||| ||||||| ||||||| || |||||||| | | || ||| Sbjct 75704 CTTGAGTCCCTTCTTCCATCCGTAAAAGTGCATCGACGTGAGCTGACCGGGGGACGGGTT 75645 Query 22228 GTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCAT 22287 | || || | |||| || || || || || |||||||| || || ||||| | Sbjct 75644 GGTCAGGTGGATGTTGAGGGATTGCGATTGGTCAATGAACGCTCCACGGTCCGCGGCAAG 75585 Query 22288 ATTTATCAATGTACGCATCGAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345 | || | || | | ||| || ||||| ||||||||||| | | ||| | | Sbjct 75584 GTCGATGA-TGGCCTTCT-GACTGATCTCCCAGACGGTCTTGTAGACCGCCTTGAAGTGT 75527 Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATC 22405 || ||| ||| | |||| ||| || | | |||||| | || ||| Sbjct 75526 GCGGGGATCCCCGGGATATTTTGGATGGAACCACCGTGGGCGATGATCCTGCTCTTCATC 75467 Query 22406 GTATCGTTCCACAAACC---GATGGCG--GTCAAATCTTTGACCAGATGACGGTTCACCA 22460 |||||||||| || | || || ||| | ||||| | | || | Sbjct 75466 TCGTCGTTCCACAGTCCTTCGTTGACGAGGTCGCG-CAGCAACCAGGGGCAG----ACGA 75412 Query 22461 CTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAG 22520 | || |||||||| | | ||||| || ||| |||||| ||| |||| || || Sbjct 75411 CCTGGAACTCGCCTGCGAGCACGCGACGGGTGTAGATGTTGCTGGTGTACGGCTCAAAGC 75352 Query 22521 ATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCG 22580 | || || || || ||||| | ||| ||||| || |||||||| |||| || |||| Sbjct 75351 ACTCGTTCCAGCCGAGGATCTGCGAGGTTGAAGCCGTAGGCATCGGAGCCACCAACAGCG 75292 Query 22581 AGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGG 22640 |||| || | |||||||| | || || |||||| | |||||||||||| || Sbjct 75291 AGTTCCTGAGACCGTGCTTGGCGATCTTGGCCTTGAGGCTGCTCCAGTCCCACAGCGAGG 75232 Query 22641 ACGGCGTCACATTGTCCCACATATCGTATTGCAA-CACGCCGCGACTCGCCGGGCTGCCT 22699 |||||| | || ||| | ||||||||||| | || || || |||||| || Sbjct 75231 TCGGCGTGA---TGCTCCAGAGGTCGTATTGCAATTTCCCCTCG-CTGGCCGGGGACCCC 75176 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 ||| || || || | || | | | |||| || ||||| || ||| | || || Sbjct 75175 GGGTAGGTCTCATAGTGGCCCTCGACCTCGGCGAGCTCGCACGACGACTCAAGGGCAGCG 75116 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGC 22819 | || || ||||| ||||| || ||| | ||| ||| || ||| | ||| Sbjct 75115 TGGTAGATGGTCTCAAAGATCTTGAGGTTGAGCTCGCGGGCCTGCTGGCCGTCGAAAGGC 75056 Query 22820 ATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTT 22879 | | | || ||| ||||| || | |||||||||||| | ||||| || |||| Sbjct 75055 AATTGAAGGGCCATGAAGGCGTCGGCAAGACCCTGAACGCCGAGACCGACGGGACGGTGA 74996 Query 22880 TTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTC 22939 || ||||| || ||||| | || || | || ||||| ||||| Sbjct 74995 CGCATGTTCGAGTTGCGGGCTTCGGGGACGGGGTAGTAGTTTACGTCGATGACCTTGTTC 74936 Query 22940 AAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT 22999 ||||| |||| || | || || | | ||||||| | ||||| Sbjct 74935 AAGTTCTTGGTGACGACCTTGGTGACGTCGTGCAGCTTTTGGAAGTCGT-ACTGCCCGTC 74877 Query 23000 TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059 || | | | || |||| || || || ||||| ||||| |||||||| | Sbjct 74876 GGTGATGTAGGCCGG--GAGAGCGAGGGAAGCGAGGTTGCAGACGGCGACCTCGTCCGGG 74819 Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119 | | |||||| | || ||||| || || ||| | |||| |||||||| | |||||| Sbjct 74818 GCAGAGTACTCGATGATCTCGGTGCAGAGGTTGGAAGACTTGATCGTGCCGAGGTTGCTC 74759 Query 23120 TGGTTG 23125 |||||| Sbjct 74758 TGGTTG 74753 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 23590 CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATAT 23649 ||| || || || || | ||||| | || || ||| || ||||| ||| || || || Sbjct 74098 CGACCCCTTGGCACGGATATTGTGGATGTTGAGACCGATCCCTCCCGCCGTCTTGGAGAT 74039 Query 23650 CATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGAC 23709 ||||||||| || || || ||||| || |||||||| |||||| || ||||||| Sbjct 74038 CATCGCGCAGGTCTTGAGGGTATCGTAAATACCCTCGATCGAGTCCTCCTTCATCGCGAC 73979 Query 23710 CAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGC 23748 | ||| ||||| |||| |||| | |||||| |||| Sbjct 73978 GAGGAAGCACGACGACAGCTGCGGGTGAGGCGTACCGGC 73940 >seq2 Length=1559663 Score = 102 bits (112), Expect = 7e-17 Identities = 155/215 (72%), Gaps = 12/215 (6%) Strand=Plus/Plus Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA- 57865 |||||| | || || || | || || || || ||||| |||||| | |||||| ||| Sbjct 1461787 GAAAACATCCACTCCGAGACCTACTCCCTCCTGATCGACACGTACATCAAGGACCCCGAA 1461846 Query 57866 CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCCAAGAAGGCAG 57924 || |||| ||||||||| ||||||| || || |||| | |||||||||||||| | Sbjct 1461847 CGCCGGTCGTAC-CTGTTCAACTCGATCGAGACCAT-CCCGTGCATCGCCAAGAAGGCCG 1461904 Query 57925 AGTGGTCAATCAAATGGAT----AAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 ||||| | |||| ||||| | ||| | | | ||||| | |||||| | ||| Sbjct 1461905 AGTGGGCGCTCAAGTGGATCTCGGATAAG----AGGTCGACGTTTGGAGAGAGGTTGATC 1461960 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGG 58015 || || ||||| || || || || ||||||||||| Sbjct 1461961 GCTTTTGCCGCTGTGGAGGGCATCTTCTTTTCGGG 1461995 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 58029 ATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATA 58088 || || ||| | ||||| || || || ||||||||||||||||| ||||||| | || Sbjct 1462082 ATCTTCTGGCTAAAGAAGCGAGGGCTCATGCCCGGCCTGACGTTCTCCAACGAGCTCATC 1462141 Query 58089 TCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 ||||||||||||||||| || || || |||||||| || Sbjct 1462142 TCGCGCGACGAGGGTCTACACACCGACTTTGCGTGTCT 1462179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766004382320