Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4 125 1e-24 seq21 118 2e-22 seq19 113 7e-21 >seq4 Length=1274754 Score = 125 bits (138), Expect = 1e-24 Identities = 92/107 (86%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| || |||||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct 718912 CTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTGGCTCGTCGTGGT 718971 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGT 16560 || ||||||||| ||||||| || |||| || |||| ||||| ||| Sbjct 718972 GGTGTCAAGCGTATCTCTGGTCTGATCTACGAGGAGACTCGTGGTGT 719018 >seq21 Length=321370 Score = 118 bits (130), Expect = 2e-22 Identities = 91/108 (84%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||||||||| ||||| |||||||| ||||||||||| Sbjct 91679 TCTTCGTGACAACATCCAGGGTATCACCAAGCCTGCTATTCGTCGTCTCGCTCGTCGTGG 91738 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGT 16560 ||| ||||||||| ||||||| ||| |||| || || | |||| ||| Sbjct 91739 TGGTGTCAAGCGTATCTCTGGCTTGATCTACGAGGAAACCCGTGGTGT 91786 >seq19 Length=488185 Score = 113 bits (124), Expect = 7e-21 Identities = 83/97 (86%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || ||||||||||| ||||||||||| || ||||||||||| |||||||||||| Sbjct 340435 CTCCGTGACAACATCCAAGGTATCACCAAGCCTGCCATCCGTCGTCTCGCTCGTCGTGGT 340494 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 || ||||||||| |||| || ||| |||| || |||| Sbjct 340495 GGTGTCAAGCGTATCTCCGGCTTGATCTACGAGGAGA 340531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075135084203