Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03-
01] 71 sequences; 22,263,516 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq16 104 2e-17
seq2 96.9 3e-15
>seq16
Length=695925
Score = 104 bits (114), Expect = 2e-17
Identities = 164/235 (70%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 145060 GACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTC 145119
||||||||| |||||||| || | ||| ||||| || | ||| ||| | || ||
Sbjct 75416 GACGACCTGGAACTCGCCTGCGAGCACGCGACGGGTGTAGATGTTGCTGGTGTACGGCTC 75357
Query 145120 AAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAA 145179
||| ||||||| ||| ||||| || | ||| | || || ||||| ||||||||
Sbjct 75356 AAAGCACTCGTTCCAGCCGAGGATCTGCGAGGTTGAAGCCGTAGGCATCGGAGCCACCAA 75297
Query 145180 TAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAG 145239
| || || | || |||||||| ||| | |||| || | | ||| ||||| ||
Sbjct 75296 CAGCGAGTTCCTGAGACCGTGCTTGGCGATCTTGGCCTTGAGGCTGCTCCAGTCCCACAG 75237
Query 145240 CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGG 145294
||| |||||| | | | ||| | |||||| ||||| | ||||||||||| |||
Sbjct 75236 CGAGGTCGGCGTGATGCTCCAGAGGTCGTATTGCAATTTCCCCTCGCTGGCCGGG 75182
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 131057 TGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCT 131116
|||| ||||||| ||||| ||||| |||||||| || ||| |||| | |||||||
Sbjct 663688 TGTAGTCGCTCAAAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCT 663747
Query 131117 GGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGG 131176
|||| || ||||| || || ||||| ||| || ||||| | || | || || |
Sbjct 663748 GGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCG 663807
Query 131177 TGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAG 131213
|||||||| |||| ||| | ||| |||||||| ||
Sbjct 663808 AGGACTCGACCTCGAGGGTGATGGTCTTACCGGTGAG 663844
>seq2
Length=1559663
Score = 96.9 bits (106), Expect = 3e-15
Identities = 100/129 (78%), Gaps = 9/129 (7%)
Strand=Plus/Plus
Query 46184 GCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATG 46242
|||| ||||||||| | ||| | ||||| | | || || | ||||| |||||
Sbjct 1462060 GCGTTTTTTTTTCTAG-------GCCTCGATCTTCTGGCTAAAGAAGCGAGGGC-TCATG 1462111
Query 46243 CCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTT 46302
|||||||||||||| ||||||||| || |||||||||||||| || || || ||||||
Sbjct 1462112 CCCGGCCTGACGTTCTCCAACGAGCTCATCTCGCGCGACGAGGGTCTACACACCGACTTT 1462171
Query 46303 GCGTGTCTC 46311
|||||||||
Sbjct 1462172 GCGTGTCTC 1462180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012381088640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |