Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03-
01] 71 sequences; 22,263,516 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 3e-20
>seq5
Length=1227613
Score = 114 bits (126), Expect = 3e-20
Identities = 136/182 (75%), Gaps = 3/182 (2%)
Strand=Plus/Plus
Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238
|| ||||| ||| | || ||||| ||| | |||| |||| || ||||||||| || ||
Sbjct 978542 GGTCCCAACGGTTCCGGCAAGTCCACCTTGGTCAAGCTCCTTACCGGCGAGACCGAGCCC 978601
Query 280239 A--CTGAGGGGTCC-GTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295
| || | ||| || |||||||| |||||| || || | ||||||||||||||||
Sbjct 978602 AACCTCGGCGGTGAAGTGTGGAAGCACCCCAACTTGGTCATCGGTTACGTCGCTCAGCAC 978661
Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355
|| |||||||||||||| ||||||| |||| ||| || | | ||||| ||||||
Sbjct 978662 GCCTTCCACCACATCGACCACCACCTCGACAAGACCCCGCTCGACTACATGTTGTGGCGT 978721
Query 280356 TA 280357
||
Sbjct 978722 TA 978723
Score = 105 bits (116), Expect = 1e-17
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758
||||| ||||| || ||||||||||||||||| || ||| | |||||||| || |
Sbjct 978059 GGTTCCCTGTCAGGCGGTTGGAAGATGAAGCTCGCACTCGCGCGCGCCATCCTGTTCAAG 978118
Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818
||||| |||| || || || ||||| || |||||| ||||| | |||||| |||||
Sbjct 978119 GCCGACATCCTCCTCCTCGACGAGCCGACTAACCACTTGGACGTCGTCAACGTCACCTGG 978178
Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878
|| | |||||| ||| || | || | ||| |||| ||||| ||||||||
Sbjct 978179 CTCATCAACTACCTCACCTCGCTCACCAACTGCACCTCCATCATCGTCTCGCACGACTCG 978238
Query 279879 GGCTTCCT 279886
| ||||||
Sbjct 978239 GACTTCCT 978246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835864989711
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |