Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5 114 3e-20 >seq5 Length=1227613 Score = 114 bits (126), Expect = 3e-20 Identities = 136/182 (75%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| ||| | |||| |||| || ||||||||| || || Sbjct 978542 GGTCCCAACGGTTCCGGCAAGTCCACCTTGGTCAAGCTCCTTACCGGCGAGACCGAGCCC 978601 Query 280239 A--CTGAGGGGTCC-GTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | || | ||| || |||||||| |||||| || || | |||||||||||||||| Sbjct 978602 AACCTCGGCGGTGAAGTGTGGAAGCACCCCAACTTGGTCATCGGTTACGTCGCTCAGCAC 978661 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| ||||||| |||| ||| || | | ||||| |||||| Sbjct 978662 GCCTTCCACCACATCGACCACCACCTCGACAAGACCCCGCTCGACTACATGTTGTGGCGT 978721 Query 280356 TA 280357 || Sbjct 978722 TA 978723 Score = 105 bits (116), Expect = 1e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 279699 GGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGT 279758 ||||| ||||| || ||||||||||||||||| || ||| | |||||||| || | Sbjct 978059 GGTTCCCTGTCAGGCGGTTGGAAGATGAAGCTCGCACTCGCGCGCGCCATCCTGTTCAAG 978118 Query 279759 GCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGG 279818 ||||| |||| || || || ||||| || |||||| ||||| | |||||| ||||| Sbjct 978119 GCCGACATCCTCCTCCTCGACGAGCCGACTAACCACTTGGACGTCGTCAACGTCACCTGG 978178 Query 279819 CTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCT 279878 || | |||||| ||| || | || | ||| |||| ||||| |||||||| Sbjct 978179 CTCATCAACTACCTCACCTCGCTCACCAACTGCACCTCCATCATCGTCTCGCACGACTCG 978238 Query 279879 GGCTTCCT 279886 | |||||| Sbjct 978239 GACTTCCT 978246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835864989711