Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 >seq6 Length=1169171 Score = 116 bits (128), Expect = 3e-21 Identities = 240/353 (68%), Gaps = 3/353 (1%) Strand=Plus/Minus Query 30041 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30100 |||| || ||||| || ||| ||| || | ||| || ||||||||| |||| || Sbjct 93705 CTTTCGGATTCCAAGCAGACATGATCATCCTCCTATCCGTCGGGTTGTTCTTGATCTTGT 93646 Query 30101 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTG 30159 | | | | | |||||| ||||| ||| | || | ||| || | | || |||| Sbjct 93645 CGATGACCTGAGCCAGCTGGTCCACTCCCTTGCCAGCGTAATCATCGTCGCAAGTCCCA- 93587 Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219 ||||||||||| || ||||||||||| ||||| || || ||||||| || || || | Sbjct 93586 TACTCTGCTCCAAAGTGCCTCCACTGAAACCCATAGACGGGTCCCAAATCACCTTCCCTC 93527 Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279 || ||| || || |||||||||| || | | || || | ||||| || || Sbjct 93526 CTATGCGTCAACCCGATCTTGTCCAAGGCTTCCCGGCTCCCATTCCCATCCCATATATTC 93467 Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30339 || ||||| || || ||| ||| || || || || || ||||||| ||||||| Sbjct 93466 ACGCCCTTGTCCGACAGCAGCTTGCCGTCCGTCGATCCGTGGATAAACCACAACAGCTCC 93407 Query 30340 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC-TGTC 30391 || || || | |||||| | ||||||||||| ||||| ||| |||| Sbjct 93406 TCAACAACTCCGCGGAGAAAGACGCGTTTGGTCGTGAGCAGGGGTAACGTGTC 93354 Score = 109 bits (120), Expect = 4e-19 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 29776 CTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCG 29835 || || || | ||| || |||||| ||| || || |||||||| ||||||||||||||| Sbjct 94062 CTCGGTTCTCGCTCTAGTTGAGTCCGCAGTGGCTCGACGTGATCGAGGTAGACGTGAGCG 94003 Query 29836 TCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTAC 29895 || |||| ||| ||||| || | |||||||||||||| ||||||| | Sbjct 94002 TCACCCATCTGAAGGATGAACTCGTGCGCCTGGGTTCCGGTGACGTGAGCGATCATGTGC 93943 Query 29896 GTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTC 29955 |||||||| | |||| |||||||| || || || ||||| || | ||| | || | Sbjct 93942 GTGAGGAGTGCGTAGGATGCGATGTTGAACGGGACGCCGAGTCCGAGGTCGCAGGAGCGT 93883 Query 29956 TGGTAGAGCTGACACGAGAG 29975 ||||| | |||| ||||| Sbjct 93882 TGGTACATGAGACATGAGAG 93863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617246418083