Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03-
01] 71 sequences; 22,263,516 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq6 116 3e-21
>seq6
Length=1169171
Score = 116 bits (128), Expect = 3e-21
Identities = 240/353 (68%), Gaps = 3/353 (1%)
Strand=Plus/Minus
Query 30041 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30100
|||| || ||||| || ||| ||| || | ||| || ||||||||| |||| ||
Sbjct 93705 CTTTCGGATTCCAAGCAGACATGATCATCCTCCTATCCGTCGGGTTGTTCTTGATCTTGT 93646
Query 30101 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTG 30159
| | | | | |||||| ||||| ||| | || | ||| || | | || ||||
Sbjct 93645 CGATGACCTGAGCCAGCTGGTCCACTCCCTTGCCAGCGTAATCATCGTCGCAAGTCCCA- 93587
Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219
||||||||||| || ||||||||||| ||||| || || ||||||| || || || |
Sbjct 93586 TACTCTGCTCCAAAGTGCCTCCACTGAAACCCATAGACGGGTCCCAAATCACCTTCCCTC 93527
Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279
|| ||| || || |||||||||| || | | || || | ||||| || ||
Sbjct 93526 CTATGCGTCAACCCGATCTTGTCCAAGGCTTCCCGGCTCCCATTCCCATCCCATATATTC 93467
Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30339
|| ||||| || || ||| ||| || || || || || ||||||| |||||||
Sbjct 93466 ACGCCCTTGTCCGACAGCAGCTTGCCGTCCGTCGATCCGTGGATAAACCACAACAGCTCC 93407
Query 30340 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC-TGTC 30391
|| || || | |||||| | ||||||||||| ||||| ||| ||||
Sbjct 93406 TCAACAACTCCGCGGAGAAAGACGCGTTTGGTCGTGAGCAGGGGTAACGTGTC 93354
Score = 109 bits (120), Expect = 4e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 29776 CTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCG 29835
|| || || | ||| || |||||| ||| || || |||||||| |||||||||||||||
Sbjct 94062 CTCGGTTCTCGCTCTAGTTGAGTCCGCAGTGGCTCGACGTGATCGAGGTAGACGTGAGCG 94003
Query 29836 TCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTAC 29895
|| |||| ||| ||||| || | |||||||||||||| ||||||| |
Sbjct 94002 TCACCCATCTGAAGGATGAACTCGTGCGCCTGGGTTCCGGTGACGTGAGCGATCATGTGC 93943
Query 29896 GTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTC 29955
|||||||| | |||| |||||||| || || || ||||| || | ||| | || |
Sbjct 93942 GTGAGGAGTGCGTAGGATGCGATGTTGAACGGGACGCCGAGTCCGAGGTCGCAGGAGCGT 93883
Query 29956 TGGTAGAGCTGACACGAGAG 29975
||||| | |||| |||||
Sbjct 93882 TGGTACATGAGACATGAGAG 93863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617246418083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |