Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq16 122 1e-21 seq11 114 2e-19 seq2 93.3 5e-13 >seq16 Length=695925 Score = 122 bits (134), Expect = 1e-21 Identities = 108/135 (80%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 ||||| || || |||| ||||||||| | |||||| ||||| || ||||| || ||| Sbjct 74064 CCGATCCCTCCCGCCGTCTTGGAGATCATCGCGCAGGTCTTGAGGGTATCGTAAATACCC 74005 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 ||||||||||| ||||||| | ||||| ||||||||||| |||||||| | ||| Sbjct 74004 TCGATCGAGTCCTCCTTCATCGCGACGAGGAAGCACGACGACAGCTGCGGGTGAGGCGTA 73945 Query 1630303 CCGGCGTTGAAGAGC 1630317 ||||||||||||||| Sbjct 73944 CCGGCGTTGAAGAGC 73930 Score = 114 bits (126), Expect = 2e-19 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 1628443 CGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCC 1628502 |||||||| || || || ||||||| ||||| ||||| || || || || |||| Sbjct 74443 CGGCGCATGAACAGATCCGGAATCCACAGCGCGTAGAAGAGATCACGAGCGCGCACCTCC 74384 Query 1628503 TCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCC 1628562 ||||||||||||||||| |||||||| |||||| | |||||||||||||||||| Sbjct 74383 TCCTTGCCGTGGTTCTTGCGGAGGTCGATAAAGTCGAACACGTCGGCGTGCCACGGCTCG 74324 Query 1628563 AGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||| ||| || || ||| |||||| ||| || Sbjct 74323 AGGTAGATGGCGAACGCTCCCGGTCGCTTGTTGCCACC 74286 Score = 96.9 bits (106), Expect = 4e-14 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 1626984 GTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGT 1627043 ||| ||||| ||||||||||||| | ||||||| | ||| || || |||||||||||||| Sbjct 75764 GTCCACGGTGAACTGGATGGCGTTGACGGCGGGGCGGGTTCGGAGGTAGTACATGCCGGT 75705 Query 1627044 CTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTC 1627103 |||||| || ||| |||| |||||||||||||| | |||| | || || Sbjct 75704 CTTGAGTCCCTTCTTCCATCCGTAAAAGTGCATCGACGTGAGCTGACCGGGGGACGGGTT 75645 Query 1627104 GGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCAT 1627163 || || | |||||| || || ||||| | | | | || || || || | Sbjct 75644 GGTCAGGTGGATGTTGAGGGATTGCGATTGGTCAATGAACGCTCCACGGTCCGCGGCAAG 75585 Query 1627164 GTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGT 1627219 ||||||| || || | | |||||| ||||||||| ||| ||||||| || Sbjct 75584 GTCGATGATGGCCTTCTGACTGATCTCCCAGACGGTCTTGTAGACCGCCTTGAAGT 75529 >seq11 Length=928691 Score = 114 bits (126), Expect = 2e-19 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 19056 GGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGCTTT 19115 ||||| || || || ||||| |||||||| || |||||||||||||| |||||| Sbjct 731482 GGCGGTACCGTCACCTGCGTTCTGCGCAACGTCCCCCACGGCCTCGGCGAGCCCTGCTTT 731541 Query 19116 GACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGATTC 19175 ||||| ||||||| ||||| |||||||||||||| |||||| ||||||| || ||| Sbjct 731542 GACAAACTCGAGGCACTCCTCGCTCACGCCATGCTGTCCATCCCGTCCACCAAAGGCTTC 731601 Query 19176 GAGATTGG 19183 ||||| || Sbjct 731602 GAGATCGG 731609 Score = 95.1 bits (104), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 18253 ATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCC 18312 |||||||| || || || |||| | ||||| ||| | ||| |||| || | ||| Sbjct 730941 ATCCAGTCCGGTACCGAACACGGTGTGACGCTTGGCACTCCCATCGGTCTTCTGGTGCAA 731000 Query 18313 AACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACAC 18372 ||| ||||| | || |||||| |||| | | | || || || || ||| Sbjct 731001 AACAAGGACCACAGACCGCACGACTACGCCGAGACGGACCTTTACCCACGACCATCCCAC 731060 Query 18373 GCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCG 18432 ||||||||||||||| | |||||||||||| ||||||| |||||||| || || || || Sbjct 731061 GCCGACTACACCTACCTCGCCAAGTACGGCGTCAAGGCTTCGTCGGGTGGTGGGAGGGCG 731120 Query 18433 TCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAAT 18484 || || | || || || | ||||| || || || |||| || |||| Sbjct 731121 TCGGCGAGAGAAACGATCGGTAGGGTCGCTGCTGGAGCTATCGCGGAAAAAT 731172 >seq2 Length=1559663 Score = 93.3 bits (102), Expect = 5e-13 Identities = 110/145 (76%), Gaps = 3/145 (2%) Strand=Plus/Minus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 |||| || ||| | |||| | ||| | | |||||||||||| | ||||||| ||| Sbjct 1462565 GACGCTCGACTTTGAGTACGCTGACACCCTCGACTCGAAAAAGTTTGCTTTGCCCTGGAG 1462506 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGA 868802 |||||||| |||||| | ||||||||| |||||| |||||| ||||||| |||| Sbjct 1462505 CGAGATCATCTCCATAAAGTCGAACGGGTT-GGCGTCGTTGTAGATCTTTTCGTTGCCGA 1462447 Query 868803 GCGACGCGAGCAGGCGGTC-GGCGA 868826 ||| |||| |||||||| ||||| Sbjct 1462446 GCGCTACGAGGAGGCGGTCTGGCGA 1462422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107133373407507