Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq16 105 1e-16 seq2 104 3e-16 >seq16 Length=695925 Score = 105 bits (116), Expect = 1e-16 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 259930 GCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAA 259989 |||||| || ||||| ||||| | ||||||| ||||||||||| || | | ||||| Sbjct 73930 GCTCTTCAACGCCGGTACGCCTCACCCGCAGCTGTCGTCGTGCTTCCTCGTCGCGATGAA 73989 Query 259990 GGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGC 260049 || || ||||||||||| || || || || |||||| |||||| | ||||||||| | Sbjct 73990 GGAGGACTCGATCGAGGGTATTTACGATACCCTCAAGACCTGCGCGATGATCTCCAAGAC 74049 Query 260050 GGCCGGCGGCATCGGT 260065 ||| || || |||||| Sbjct 74050 GGCGGGAGGGATCGGT 74065 Score = 91.5 bits (100), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| |||||| ||| || || ||| |||||| || ||||||||||||||| | Sbjct 74286 GGTGGCAACAAGCGACCGGGAGCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACGTG 74345 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||| | |||||| |||||||||||||| ||||| || | |||| || Sbjct 74346 TTCGACTTTATCGACCTCCGCAAGAACCACGGCAA-GGAGGAGG-----TGCGCGCTCGT 74399 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 |||||||| |||| ||||||| || ||||| |||||||| | | | | | | | Sbjct 74400 GATCTCTTCTACGCGCTGTGGATTCCGGATCTGTTCATGCGCCGTGTCGAGTCGGACGGG 74459 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAG 261994 || ||| || | | |||||| |||| Sbjct 74460 GAGTGGGCGTTGATGTGCCCGCACGAG 74486 >seq2 Length=1559663 Score = 104 bits (114), Expect = 3e-16 Identities = 158/217 (73%), Gaps = 15/217 (7%) Strand=Plus/Plus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 |||||||||||||| || |||||||| |||||||||||||| ||| |||||||||| | Sbjct 1461787 GAAAACATCCACTCCGAGACCTACTCCCTCCTGATCGACACGTACATCAAGGACCC---C 1461843 Query 1456075 GA--GAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 || | || | |||| || | | ||||| || | |||| | || |||||| Sbjct 1461844 GAACGCCGGTCGTACCTGTTCAACTCGATCGAGACCATCCCGTGCATCGCCAAGAAGGCC 1461903 Query 1456132 GACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 || |||||| | ||||||||| | ||| ||| ||||| |||| ||| || | Sbjct 1461904 GAGTGGGCGCTCAAGTGGATCTCGGATAAG-AGG---TCGACG-TTTGGAGAGAGGTTGA 1461958 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGG 1456224 ||| |||||||| || ||||||||||| || ||||| Sbjct 1461959 TCGCTTTTGCCGCTGTGGAGGGCATCTTCTTTTCGGG 1461995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177804351919502