Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq16 178 1e-39 seq10 105 8e-18 seq6 91.5 2e-13 seq2 86.0 7e-12 >seq16 Length=695925 Score = 178 bits (196), Expect = 1e-39 Identities = 448/673 (67%), Gaps = 25/673 (4%) Strand=Plus/Minus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415 ||||| || ||||| |||||| || | ||| | ||||| |||||||| |||| Sbjct 75406 AACTCGCCTGCGAGCACGCGACGGGTGTAGATGTTGCTGGTGTACGGCTCAAAGCACTCG 75347 Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475 || ||||||||||| | || ||||| |||||||| | |||||||| || ||| Sbjct 75346 TTCCAGCCGAGGATCTGCGAGGTTGAAGCCGTAGGCATCGGAGCCACCAACAGCGAGTTC 75287 Query 80476 CGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGACCAAAAATCAACCCCAA-- 80530 | || |||||||| ||| | ||| | | ||| | | || | | Sbjct 75286 CTGAGACCGTGCTTGGCGATCTTGGCCTTGAGG----CTGCTCCAGTCCCACAGCGAGGT 75231 Query 80531 CGCTGTGA--CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAA 80588 || |||| | ||| | ||||| ||||| | ||||| ||||| ||||||| | | Sbjct 75230 CGGCGTGATGCTCCAGAGGTCGTATTGCAATTTCCCCTCGCTGGCCGGGGACCCCGGGTA 75171 Query 80589 CGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATA 80648 ||||| || ||||||| || ||| ||||| |||||| | |||||| ||||| || Sbjct 75170 GGTCTCATAGTGGCCCTCGACCTCGGCGAGCTCGCACGACGACTCAAGGGCAGCGTGGTA 75111 Query 80649 AATGCACTCAAAGACGCCCTTG---TTCACACCGCGCGCCTGTGGGTCGTCGAACGACAA 80705 ||| |||||||| |||| || | |||| ||||| || ||||||| | ||| Sbjct 75110 GATGGTCTCAAAGAT---CTTGAGGTTGAGCTCGCGGGCCTGCTGGCCGTCGAAAGGCAA 75054 Query 80706 GCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCG 80765 | |||||| |||| || || ||||||||||||| ||| || ||||| || Sbjct 75053 TTGAAGGGCCATGAAGGCGTCGGCAAGACCCTGAACGCCGAGACCGACGGGACGGTGACG 74994 Query 80766 CTTGTTCGA-TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCA 80824 | ||||||| | || ||| || || | ||||| |||| |||||||| ||||| Sbjct 74993 CATGTTCGAGTTGC-GGGCTTCGGGGACGGGGTAGTAGTTTACGTCGATGACCTTGTTCA 74935 Query 80825 GGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT 80884 ||| || || ||| || || || || || || || |||||| | || ||| | Sbjct 74934 AGTTCTTGGTGACGACCTTGGTGACGTCGTGCAGCTTTTGGAAGTCGTACTG---CCCGT 74878 Query 80885 ---TCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941 | | | ||||| || ||||| || || ||||| ||||| ||||| || | Sbjct 74877 CGGTGATGTAGGCCGGGAGAGCGAGGGAAGCGAGGTTGCAGACGGCGACCTCGTCCGGGG 74818 Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001 | | |||||| ||| || ||||| | || |||||||| || || || ||||| ||| Sbjct 74817 CAGAGTACTCGATGATCTCGGTGCAGAGGTTGGAAGACTTGATCGTGCCGAGGTTGCTCT 74758 Query 81002 GGTTTGACTTGGC 81014 |||| || ||||| Sbjct 74757 GGTTGGATTTGGC 74745 Score = 93.3 bits (102), Expect = 5e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || ||||| ||||| || || || ||||| ||||| || | ||| | || | ||| Sbjct 663844 CTCACCGGTAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 663785 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 | || || |||||||||||||| || || || ||||||||||| || || || || || Sbjct 663784 TCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGCGCCTCATCTTCGCCGGA 663725 Query 27547 AAGCAACTCGAGGATG 27562 ||||| |||||||||| Sbjct 663724 AAGCAGCTCGAGGATG 663709 >seq10 Length=941375 Score = 105 bits (116), Expect = 8e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 27437 AGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTC 27496 |||| || || || ||||| ||||| ||| | ||||| ||| | ||| | || |||| Sbjct 356329 AGACCATCACCCTCGAGGTCGAGTCCTCTGACACCATTGACAATGTCAAGTCGAAGATTC 356388 Query 27497 AGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCG 27556 ||||||||||||| || || || ||||| |||||| | || |||||||| ||||| |||| Sbjct 356389 AGGACAAGGAGGGTATCCCACCCGACCAACAGCGTTTGATCTTTGCTGGAAAGCAGCTCG 356448 Query 27557 AGGATG 27562 |||||| Sbjct 356449 AGGATG 356454 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||| | || || |||||||||||||| ||||| || || ||||||||||| || |||||| Sbjct 357154 AAGTCCAAGATCCAGGACAAGGAGGGTATTCCACCTGATCAGCAGCGTCTCATCTTTGCT 357213 Query 27544 GGTAAGCAACTCGAGGA 27560 || ||||| |||||||| Sbjct 357214 GGCAAGCAGCTCGAGGA 357230 >seq6 Length=1169171 Score = 91.5 bits (100), Expect = 2e-13 Identities = 199/303 (66%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 24584 CGAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCGTTTGACCAACCCGAGTA 24643 |||| | || ||||| || ||||| || ||||||||| | || || || |||| || Sbjct 479459 CGAGATATACAACCTCGGCGCCCAATCGCACGTCAAGGTATCCTTCGAGATGGCCGAATA 479518 Query 24644 CACGGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNNNN 24703 ||| | |||| || | ||||||||| || | | || || || || || Sbjct 479519 CACCGGGGACGTCGACGGTCTAGGCACTCTCCGCCTGCTCGACGCGATCCGTACGTGTGG 479578 Query 24704 NNNNNNNTTGAAATTCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCA 24763 | | ||||||| || || ||| ||| ||| ||| ||| |||||||| Sbjct 479579 ATTGGAGAAGCACGTCAGATTCTACCAAGCGTCCACGTCGGAGCTGTATGGTAAGGTGCA 479638 Query 24764 GGAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAA 24823 ||||| || ||| ||||| || || |||||||| | |||||||||||| | || Sbjct 479639 GGAGATACCGCAGAGCGAGACGACGCCGTTTTATCCTAGGTCCCCGTATGGGGTGGCCAA 479698 Query 24824 GGTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAA 24883 | ||| ||| || ||||| ||| || || ||| | | ||||| ||||| || || Sbjct 479699 GTTGTACGCTTATTGGATCGTGGTGAATTATCGAGAGTCGTACGGGATGTATGCTTGTAA 479758 Query 24884 CGG 24886 ||| Sbjct 479759 CGG 479761 >seq2 Length=1559663 Score = 86.0 bits (94), Expect = 7e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 64771 TCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTG 64830 || || ||||||||||| ||||| || || ||||| || ||| |||| || |||||||| Sbjct 1462079 TCGATCTTCTGGCTAAAGAAGCGAGGGCTCATGCCCGGCCTGACGTTCTCCAACGAGCTC 1462138 Query 64831 ATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAG 64890 ||||| || |||||||| || ||| || |||||| | ||| |||| || || ||| Sbjct 1462139 ATCTCGCGCGACGAGGGTCTACACACCGACTTTGCGTGTCTCCTCTTCACGCATCTGAAG 1462198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309893849520