Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq16 118 2e-21 seq6 114 3e-20 seq10 102 2e-16 >seq16 Length=695925 Score = 118 bits (130), Expect = 2e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995 |||||||||||||| || || || ||||| ||||| | || || ||||| || ||| Sbjct 663702 GTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGTGGGATA 663761 Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| ||| Sbjct 663762 CCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCG 663821 Query 283056 AGAGTGATCGTCTTACCCGT 283075 || ||||| |||||||| || Sbjct 663822 AGGGTGATGGTCTTACCGGT 663841 >seq6 Length=1169171 Score = 114 bits (126), Expect = 3e-20 Identities = 128/168 (76%), Gaps = 5/168 (3%) Strand=Plus/Plus Query 43974 TCGGATT-TGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAA 44032 || |||| | ||||||||| || |||||| |||| || ||||| |||||||| || || | Sbjct 479593 TCAGATTCTACCAAGCGTCCACGTCGGAGCTGTATGGTAAGGTGCAGGAGATACCGCAGA 479652 Query 44033 CAGAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATT 44092 || | ||| ||||||||||| || || ||||| ||||| ||| | || || |||| Sbjct 479653 GCGAGACGACGCCGTTTTATCCTAGGTCCCCGTATGGGGTGGCCAAGTTGTACGCTTATT 479712 Query 44093 GGAT--TTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAA 44138 |||| | || |||||||| |||||||| ||||||| | |||||| Sbjct 479713 GGATCGTGGT--GAATTATCGAGAGTCGTACGGGATGTATGCTTGTAA 479758 >seq10 Length=941375 Score = 102 bits (112), Expect = 2e-16 Identities = 113/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 282922 TGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGT 282980 ||||||| |||| || | ||||||||| || || || || |||||||||||||| ||| Sbjct 356475 TGTAGTCGCTCAAG-GTCCTGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGCTGT 356417 Query 282981 TGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCC 283040 ||||| || |||||||||||||| || ||||| | || || | || || ||||| Sbjct 356416 TGGTCGGGTGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCA 356357 Query 283041 GAAGCTTCGACTTCGAGAGTGATCGTCT 283068 || | ||||| ||||| ||||| |||| Sbjct 356356 GAGGACTCGACCTCGAGGGTGATGGTCT 356329 Score = 100 bits (110), Expect = 6e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 282935 CGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAAT 282994 ||| | ||| ||||| || || || ||||| ||||||| ||| || ||||| ||| || Sbjct 356853 CGTCCTGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGAT 356794 Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042 ||||||||||||||||||||||| || ||| | ||||| |||||||| Sbjct 356793 ACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCCGA 356746 Score = 96.9 bits (106), Expect = 7e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| ||||| | ||| ||||| || || || || |||||||| | ||| || | Sbjct 357253 TGTAGTCGCTCAGCGTCCTGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCT 357194 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 | ||| ||||||||||||||||| |||||||| | || ||| | ||||| ||||| | Sbjct 357193 GATCAGGTGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGG 357134 Query 283042 AAGCTTCGACTTC 283054 ||| ||| || || Sbjct 357133 AAGATTCCACCTC 357121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738247794434