Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03-
01] 71 sequences; 22,263,516 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq16 118 2e-21
seq6 114 3e-20
seq10 102 2e-16
>seq16
Length=695925
Score = 118 bits (130), Expect = 2e-21
Identities = 110/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995
|||||||||||||| || || || ||||| ||||| | || || ||||| || |||
Sbjct 663702 GTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCGGGTGGGATA 663761
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| |||
Sbjct 663762 CCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCG 663821
Query 283056 AGAGTGATCGTCTTACCCGT 283075
|| ||||| |||||||| ||
Sbjct 663822 AGGGTGATGGTCTTACCGGT 663841
>seq6
Length=1169171
Score = 114 bits (126), Expect = 3e-20
Identities = 128/168 (76%), Gaps = 5/168 (3%)
Strand=Plus/Plus
Query 43974 TCGGATT-TGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAA 44032
|| |||| | ||||||||| || |||||| |||| || ||||| |||||||| || || |
Sbjct 479593 TCAGATTCTACCAAGCGTCCACGTCGGAGCTGTATGGTAAGGTGCAGGAGATACCGCAGA 479652
Query 44033 CAGAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATT 44092
|| | ||| ||||||||||| || || ||||| ||||| ||| | || || ||||
Sbjct 479653 GCGAGACGACGCCGTTTTATCCTAGGTCCCCGTATGGGGTGGCCAAGTTGTACGCTTATT 479712
Query 44093 GGAT--TTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAA 44138
|||| | || |||||||| |||||||| ||||||| | ||||||
Sbjct 479713 GGATCGTGGT--GAATTATCGAGAGTCGTACGGGATGTATGCTTGTAA 479758
>seq10
Length=941375
Score = 102 bits (112), Expect = 2e-16
Identities = 113/148 (76%), Gaps = 2/148 (1%)
Strand=Plus/Minus
Query 282922 TGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGT 282980
||||||| |||| || | ||||||||| || || || || |||||||||||||| |||
Sbjct 356475 TGTAGTCGCTCAAG-GTCCTGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGCTGT 356417
Query 282981 TGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCC 283040
||||| || |||||||||||||| || ||||| | || || | || || |||||
Sbjct 356416 TGGTCGGGTGGGATACCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCAATGGTGTCA 356357
Query 283041 GAAGCTTCGACTTCGAGAGTGATCGTCT 283068
|| | ||||| ||||| ||||| ||||
Sbjct 356356 GAGGACTCGACCTCGAGGGTGATGGTCT 356329
Score = 100 bits (110), Expect = 6e-16
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 282935 CGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAAT 282994
||| | ||| ||||| || || || ||||| ||||||| ||| || ||||| ||| ||
Sbjct 356853 CGTCCTGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGCGGGAT 356794
Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042
||||||||||||||||||||||| || ||| | ||||| ||||||||
Sbjct 356793 ACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCCGA 356746
Score = 96.9 bits (106), Expect = 7e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981
||||||| ||||| | ||| ||||| || || || || |||||||| | ||| || |
Sbjct 357253 TGTAGTCGCTCAGCGTCCTGCCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCT 357194
Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041
| ||| ||||||||||||||||| |||||||| | || ||| | ||||| ||||| |
Sbjct 357193 GATCAGGTGGAATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGG 357134
Query 283042 AAGCTTCGACTTC 283054
||| ||| || ||
Sbjct 357133 AAGATTCCACCTC 357121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738247794434
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |