Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20phenolicus_20[genbank_20GCA_5F001600015.1_202016-03- 01] 71 sequences; 22,263,516 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq10 136 1e-26 seq16 134 3e-26 >seq10 Length=941375 Score = 136 bits (150), Expect = 1e-26 Identities = 116/143 (81%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 177954 ACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAG 178013 || |||||||| || || || || || ||||||||||| |||||||| ||||||||| Sbjct 357486 ACCATCACCCTGGAAGTTGAGAGTTCCGACACCATCGACAACGTCAAGTCCAAGATTCAG 357545 Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| ||||| || || ||||| || |||||||||||||| || |||||||| Sbjct 357546 GACAAGGAAGGTATCCCACCTGATCAGCAGCGTCTTATCTTCGCCGGGAAGCAGCTCGAG 357605 Query 178074 GATGGAAGGACTCTTGCCGATTA 178096 || || ||||||||| | || || Sbjct 357606 GACGGCAGGACTCTTTCAGACTA 357628 Score = 111 bits (122), Expect = 4e-19 Identities = 107/136 (79%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 177954 ACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAG 178013 || |||||||||||||| || ||| |||||||| || || ||||| ||||||||| Sbjct 356331 ACCATCACCCTCGAGGTCGAGTCCTCTGACACCATTGACAATGTCAAGTCGAAGATTCAG 356390 Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || ||||| || ||||| || || | ||||| || ||||| |||||||| Sbjct 356391 GACAAGGAGGGTATCCCACCCGACCAACAGCGTTTGATCTTTGCTGGAAAGCAGCTCGAG 356450 Query 178074 GATGGAAGGACTCTTG 178089 ||||| ||||| |||| Sbjct 356451 GATGGCAGGAC-CTTG 356465 Score = 107 bits (118), Expect = 5e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 177966 GAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGA 178025 |||||||| || ||||||||||| |||||||| |||||| || ||||| || || Sbjct 356734 GAGGTGGAGTCGTCGGACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGT 356793 Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGAC 178084 ||||| || |||||||| || || ||||||||||| || |||||||| || || ||||| Sbjct 356794 ATCCCGCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCAGGAC 356852 Score = 95.1 bits (104), Expect = 3e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 177966 GAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGA 178025 ||||||||| || ||||||||||| |||||||| ||||| |||||||| || || Sbjct 357121 GAGGTGGAATCTTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGT 357180 Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 || || || || ||||| || || ||||| || || || |||||||| || || ||||| Sbjct 357181 ATTCCACCTGATCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAGGACGGCAGGACG 357240 Query 178086 CT 178087 || Sbjct 357241 CT 357242 Score = 95.1 bits (104), Expect = 3e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||| |||| |||||||| ||||| ||||| || ||||||||||| || |||||||| || Sbjct 671044 CAACAGATCCAGGACAAGGAAGGTATCCCACCTGACCAGCAACGTCTCATCTTCGCTGGC 670985 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || |||||||||||||| | || ||| |||| || Sbjct 670984 AAGCAGCTCGAAGATGGTCGCACCCTTTCCGACTA 670950 >seq16 Length=695925 Score = 134 bits (148), Expect = 3e-26 Identities = 112/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || |||||||||||||| || ||| ||||||||||| |||||||| Sbjct 663844 CTCACCGGTAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 663785 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || || |||||||||||| Sbjct 663784 TCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGCGCCTCATCTTCGCCGGA 663725 Query 178062 AAACAGCTCGAAGATGG 178078 || |||||||| ||||| Sbjct 663724 AAGCAGCTCGAGGATGG 663708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730104980774