Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 122 1e-22 >seq1 Length=2435598 Score = 122 bits (134), Expect = 1e-22 Identities = 273/410 (67%), Gaps = 0/410 (0%) Strand=Plus/Minus Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 ||||||||||| |||| ||||||||||| | ||||||||| || || | || || | Sbjct 131150 AATCCAGGACACTCATGTGGACACATCAAAGCCCACTCTCCATCCTCTTCTACACGACGC 131091 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 || || ||||| || ||||| | || |||| ||| | | || | ||| || || Sbjct 131090 ATGAAAAGATCCGGGATCCACAACGCGTAGAATAAATCACGAGCTCGAACTTCTTCTTTA 131031 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || ||| ||| ||||||| || | | || || | ||||| || || | ||| Sbjct 131030 CCGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAA 130971 Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217 |||| | | | || || || ||||| || || ||||| | ||||| |||||| | Sbjct 130970 ATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGACGTATCGAGCGGTTGCGTCG 130911 Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277 ||| ||| | ||| |||| ||||| || || || || || || | ||| || Sbjct 130910 TAAGCTCGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAA 130851 Query 54278 CCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAAT 54337 || |||||||||| || ||| ||||| || || ||||| | || ||||| | Sbjct 130850 CCCTTGGCACGAATGTTGTGAATGTTGAGACCGATACCACCTGCTGTCTTGGAGATCATG 130791 Query 54338 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 54387 || || ||| | ||||||||||| || || || ||| ||| |||| Sbjct 130790 GCACAAGTTTTGAGAGTATCATAGATACCTTCGATGGAATCCTCCTTCAT 130741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721013699920