Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq9 100 4e-16
seq8 91.5 2e-13
>seq9
Length=1075742
Score = 100 bits (110), Expect = 4e-16
Identities = 240/360 (67%), Gaps = 5/360 (1%)
Strand=Plus/Plus
Query 205610 CATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattt 205669
|| || |||||||||| |||| || | || | ||| || |||||| | ||||
Sbjct 471696 CACCTTTAGGATTCCAAGCTGACAAAACGATCCTCCTATCCGTTGGATTATTTCTAATTT 471755
Query 205670 tatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC-CATATCA 205728
| | |||| || | |||||||| | |||| | |||||| ||| || ||
Sbjct 471756 TTTCAATAACCTGCGCCAATTGATCCACCCCTTTCCCTCTATAATCATCATCACAAGTCC 471815
Query 205729 ATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCT 205788
||||| || || ||||| | ||||||||| |||||||| || || | |||||||| |
Sbjct 471816 C-ATATTCTGCTCCGAAATGTCTCCATTGAAATCCATAAACCGGTCCAAGATCACCTTGT 471874
Query 205789 TTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaata 205848
||||||| || || ||| ||| | | ||| | | |||||| ||||||||||
Sbjct 471875 CTTCTATCTTTCAATCCAACTTTATCCAAATACTCTCTACTTCCATTCCCATCCCAAATC 471934
Query 205849 tggattcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAAT 205908
|||||| || || | ||| || ||||| || |||||||| | ||||
Sbjct 471935 CCAATTCCTAAATCCGATAATAAATTCCCATCTGTTGAACCCCGAATAAACCAAAGTAAT 471994
Query 205909 TCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAA---TGAATCA 205965
|||||||||| || | |||| | | ||| || || | |||||| || |||||||
Sbjct 471995 TCTTCAACAACACCACGTAAAAAAACTCTTTTAGTAGTGAGTAATGGGAAAGTTGAATCA 472054
>seq8
Length=1050647
Score = 91.5 bits (100), Expect = 2e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || |||| | ||| || |||||||||||||||||||| ||||||||||||
Sbjct 743245 GATACGATCGATAATGTCAAATCAAAGATTCAAGATAAAGAAGGTATTCCACCTGATCAA 743304
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
|| ||| | |||||||| || || || || |||||| | | ||||| |||||||
Sbjct 743305 CAGAGGTTGATTTTTGCTGGGAAGCAGTTGGAGGATGGGAGGACATTGAGTGATTATA 743362
Score = 91.5 bits (100), Expect = 2e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || |||| | ||| || |||||||||||||||||||| ||||||||||||
Sbjct 743676 GATACTATCGATAATGTCAAATCCAAGATTCAAGATAAAGAAGGTATCCCACCTGATCAA 743735
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716
||| | |||||||| || || |||||||| || || || | || || |||||||
Sbjct 743736 CAACGTCTTATTTTCGCTGGTAAACAATTGGAAGACGGTAGGACTTTGAGTGATTATA 743793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455253987200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |