Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq8 102 7e-17 seq5 84.2 2e-11 >seq8 Length=1050647 Score = 102 bits (112), Expect = 7e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 ||| |||||||| |||||||| |||| |||||||||||||| || || || |||||||| Sbjct 744738 ATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATACCCTCCTT 744679 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 |||| ||| || ||| || | |||| || || | ||| ||||| | || | Sbjct 744678 GTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAAGACTCTACCTCCAACGTGAT 744619 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || |||| |||||| ||||| || ||||| Sbjct 744618 AGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCAT 744583 >seq5 Length=1209326 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | |||||||| || || ||||||||||| | ||| | ||||||| Sbjct 1116741 ACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCG 1116800 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || |||||| |||| | | ||| ||||| || || || ||||||||||| Sbjct 1116801 AGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGG 1116860 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| ||||||| ||| | || || Sbjct 1116861 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTA 1116920 Query 118710 CCGGTCAGA 118718 || || ||| Sbjct 1116921 CCTGTAAGA 1116929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829982302668