Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 4e-28
>seq1
Length=2435598
Score = 140 bits (154), Expect = 4e-28
Identities = 371/564 (66%), Gaps = 2/564 (0%)
Strand=Plus/Minus
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
||||| || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | |
Sbjct 131303 GCATCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 131244
Query 63123 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTA-TA 63181
|| | | | || || || || |||| | | | || |||||| || | ||
Sbjct 131243 CATAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTAT-GACTCGTA 131185
Query 63182 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACAT 63241
| | ||||| | | ||| | || | | |||| |||||| |||| ||||||||
Sbjct 131184 TAGTTCATCGAAAGCCTTTCCATGACAATCGGCTAATCCAGGACACTCATGTGGACACAT 131125
Query 63242 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63301
||| | ||||||||| || || | || || ||| || ||||| || ||||| | ||
Sbjct 131124 CAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGC 131065
Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361
|||| ||| | | || | ||| || || || ||| ||| ||||||| ||
Sbjct 131064 GTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAA 131005
Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421
| | || || | ||||| || || | ||| ||||| | | | || || || |||||
Sbjct 131004 GTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGTT 130945
Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481
|| || ||||| | ||||| |||||| | ||| ||| | ||| |||| |||||
Sbjct 130944 ACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACC 130885
Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541
||| || || || ||||| | ||| || || |||||||||| || |||
Sbjct 130884 GTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGTT 130825
Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601
||||| || || ||||| | || ||||| | || || ||| | || ||||||||
Sbjct 130824 GAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGAT 130765
Query 63602 GCCTTCTATGCTATCATCGATCAT 63625
||||| ||| ||| || ||||
Sbjct 130764 ACCTTCGATGGAATCCTCCTTCAT 130741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816978055120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |