Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1 140 4e-28 >seq1 Length=2435598 Score = 140 bits (154), Expect = 4e-28 Identities = 371/564 (66%), Gaps = 2/564 (0%) Strand=Plus/Minus Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 ||||| || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | | Sbjct 131303 GCATCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 131244 Query 63123 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTA-TA 63181 || | | | || || || || |||| | | | || |||||| || | || Sbjct 131243 CATAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTAT-GACTCGTA 131185 Query 63182 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACAT 63241 | | ||||| | | ||| | || | | |||| |||||| |||| |||||||| Sbjct 131184 TAGTTCATCGAAAGCCTTTCCATGACAATCGGCTAATCCAGGACACTCATGTGGACACAT 131125 Query 63242 CAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 63301 ||| | ||||||||| || || | || || ||| || ||||| || ||||| | || Sbjct 131124 CAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGC 131065 Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361 |||| ||| | | || | ||| || || || ||| ||| ||||||| || Sbjct 131064 GTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAA 131005 Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421 | | || || | ||||| || || | ||| ||||| | | | || || || ||||| Sbjct 131004 GTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGTT 130945 Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481 || || ||||| | ||||| |||||| | ||| ||| | ||| |||| ||||| Sbjct 130944 ACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACC 130885 Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGA 63541 ||| || || || ||||| | ||| || || |||||||||| || ||| Sbjct 130884 GTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGTT 130825 Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 ||||| || || ||||| | || ||||| | || || ||| | || |||||||| Sbjct 130824 GAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGAT 130765 Query 63602 GCCTTCTATGCTATCATCGATCAT 63625 ||||| ||| ||| || |||| Sbjct 130764 ACCTTCGATGGAATCCTCCTTCAT 130741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816978055120