Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 6e-18
>seq1
Length=2435598
Score = 105 bits (116), Expect = 6e-18
Identities = 269/404 (67%), Gaps = 4/404 (1%)
Strand=Plus/Minus
Query 37959 ATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTAC 38018
|||| |||||| ||||| || ||||||||| | || ||| ||| |||| | ||||||
Sbjct 131157 ATCGGCTAATCCAGGACACTCATGTGGACACATCAAAGCCCACTCTCCATCCTCTTCTAC 131098
Query 38019 GCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATT 38077
|| ||| || | ||| || | ||| || || ||| |||||||| | || | ||
Sbjct 131097 ACGACGCATGAAAAGATCCGGGATCCACAACGC-GTAGAATAAATCACGAGCTCGAACTT 131039
Query 38078 CTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTT 38137
|||| || || ||| |||| || | ||| ||||| | || ||||||||||| |
Sbjct 131038 CTTCTTTACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCT 130979
Query 38138 CTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTG 38197
| | ||||| | | || ||||||| || | ||| || |||| | |||| | | |
Sbjct 130978 CGAGGTAAATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGACGTATCGAGCGG 130919
Query 38198 TGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATA 38257
| | || || | |||||| || ||||| || || | |||||| |||| | |
Sbjct 130918 TTGCGTCGTAAGCTCGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGA 130859
Query 38258 TATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGT-TTT 38316
| |||| |||||| || || || || || | || || |||||||| ||| ||
Sbjct 130858 TGTAAGAACCCTTGGCACGAATGTTGTGAATGTTGAGACCGATACCACCTGC-TGTCTTG 130800
Query 38317 GATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTAT 38360
|| || | || || ||| | |||||| | |||||||| ||
Sbjct 130799 GAGATCATGGCACAAGTTTTGAGAGTATCATAGATACCTTCGAT 130756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524337331760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |