Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 >seq1 Length=2435598 Score = 105 bits (116), Expect = 6e-18 Identities = 269/404 (67%), Gaps = 4/404 (1%) Strand=Plus/Minus Query 37959 ATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTAC 38018 |||| |||||| ||||| || ||||||||| | || ||| ||| |||| | |||||| Sbjct 131157 ATCGGCTAATCCAGGACACTCATGTGGACACATCAAAGCCCACTCTCCATCCTCTTCTAC 131098 Query 38019 GCGTTCCATAAATAAATCAGGTACCCATAATGCAGTA-AATAAATCTTTGGTTCTATATT 38077 || ||| || | ||| || | ||| || || ||| |||||||| | || | || Sbjct 131097 ACGACGCATGAAAAGATCCGGGATCCACAACGC-GTAGAATAAATCACGAGCTCGAACTT 131039 Query 38078 CTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTT 38137 |||| || || ||| |||| || | ||| ||||| | || ||||||||||| | Sbjct 131038 CTTCTTTACCGTGATTTTTTCGTAGATCGATAAAGTCGAAAACGTCGGCGTGCCATGGCT 130979 Query 38138 CTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTG 38197 | | ||||| | | || ||||||| || | ||| || |||| | |||| | | | Sbjct 130978 CGAGGTAAATGGCAAAAGCACCTGGTCGCTTGTTACCACCTTGATCGACGTATCGAGCGG 130919 Query 38198 TGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATA 38257 | | || || | |||||| || ||||| || || | |||||| |||| | | Sbjct 130918 TTGCGTCGTAAGCTCGAAGCATAGGAACGATACCGTTCGAGTACCCGTTTGTACCAGCGA 130859 Query 38258 TATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGT-TTT 38316 | |||| |||||| || || || || || | || || |||||||| ||| || Sbjct 130858 TGTAAGAACCCTTGGCACGAATGTTGTGAATGTTGAGACCGATACCACCTGC-TGTCTTG 130800 Query 38317 GATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTAT 38360 || || | || || ||| | |||||| | |||||||| || Sbjct 130799 GAGATCATGGCACAAGTTTTGAGAGTATCATAGATACCTTCGAT 130756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524337331760