Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 129 8e-25 >seq1 Length=2435598 Score = 129 bits (142), Expect = 8e-25 Identities = 373/566 (66%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 ||||| || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | | Sbjct 131303 GCATCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 131244 Query 65916 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTAT-AGT-GTAT 65973 || | | | || || || || |||| | | || |||||| | | |||| Sbjct 131243 CATAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 131184 Query 65974 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 66033 | || | |||| | | ||| | || | | ||||||||||| |||| ||||||| Sbjct 131183 AGT-TCAT-CGAAAGCCTTTCCATGACAATCGGCTAATCCAGGACACTCATGTGGACACA 131126 Query 66034 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 66093 |||| | ||||||||| || || | || || ||| || ||||| || ||||| | | Sbjct 131125 TCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACG 131066 Query 66094 CTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 66153 | |||||||| | | || | ||| || || || ||| ||| ||||||| | Sbjct 131065 CGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAA 131006 Query 66154 ACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 66213 | | | || || ||||| || || | ||| ||||| | | | || || || |||| Sbjct 131005 AGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGT 130946 Query 66214 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 66273 | || || ||||| | ||||| |||||| | ||| ||| | ||| |||| |||| Sbjct 130945 TACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATAC 130886 Query 66274 CATTGGATGTACCA-TTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATT 66332 | || || ||||| || || || | ||| || || | |||||||| || ||| Sbjct 130885 CGTTCGA-GTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATG 130827 Query 66333 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 66392 ||||| || || ||||| | || ||||| | || || ||| | ||||||||| Sbjct 130826 TTGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAG 130767 Query 66393 ATGCCCTCTATACTATCATCCATCAT 66418 || || || || ||| ||| |||| Sbjct 130766 ATACCTTCGATGGAATCCTCCTTCAT 130741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172150054360