Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1 129 8e-25
>seq1
Length=2435598
Score = 129 bits (142), Expect = 8e-25
Identities = 373/566 (66%), Gaps = 6/566 (1%)
Strand=Plus/Minus
Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915
||||| || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | |
Sbjct 131303 GCATCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 131244
Query 65916 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTAT-AGT-GTAT 65973
|| | | | || || || || |||| | | || |||||| | | ||||
Sbjct 131243 CATAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 131184
Query 65974 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 66033
| || | |||| | | ||| | || | | ||||||||||| |||| |||||||
Sbjct 131183 AGT-TCAT-CGAAAGCCTTTCCATGACAATCGGCTAATCCAGGACACTCATGTGGACACA 131126
Query 66034 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 66093
|||| | ||||||||| || || | || || ||| || ||||| || ||||| | |
Sbjct 131125 TCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACG 131066
Query 66094 CTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 66153
| |||||||| | | || | ||| || || || ||| ||| ||||||| |
Sbjct 131065 CGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAA 131006
Query 66154 ACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 66213
| | | || || ||||| || || | ||| ||||| | | | || || || ||||
Sbjct 131005 AGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGT 130946
Query 66214 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 66273
| || || ||||| | ||||| |||||| | ||| ||| | ||| |||| ||||
Sbjct 130945 TACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATAC 130886
Query 66274 CATTGGATGTACCA-TTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATT 66332
| || || ||||| || || || | ||| || || | |||||||| || |||
Sbjct 130885 CGTTCGA-GTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATG 130827
Query 66333 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 66392
||||| || || ||||| | || ||||| | || || ||| | |||||||||
Sbjct 130826 TTGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAG 130767
Query 66393 ATGCCCTCTATACTATCATCCATCAT 66418
|| || || || ||| ||| ||||
Sbjct 130766 ATACCTTCGATGGAATCCTCCTTCAT 130741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172150054360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |