Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 9e-31
>seq1
Length=2435598
Score = 149 bits (164), Expect = 9e-31
Identities = 373/564 (66%), Gaps = 2/564 (0%)
Strand=Plus/Minus
Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794
||||| || ||||| ||||| ||| |||||| ||| |||| | ||| | ||| || | |
Sbjct 131303 GCATCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 131244
Query 79795 CAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854
|| | | | || || || || | |||| | | || |||||| |||
Sbjct 131243 CATAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 131184
Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914
| | ||||| | | ||| | |||| ||||||||||||| || | |||||||||
Sbjct 131183 AGTTCATCGAAAGCCTTTCCATGACAATCGGCTAATCCAGGACACTCATGTGGACACATC 131124
Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974
|| | |||||||||||| || | ||| || ||| || ||||| || ||||| | ||
Sbjct 131123 AAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCG 131064
Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034
|||| ||| | | || | || || || || ||| ||| ||||||| ||
Sbjct 131063 TAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAG 131004
Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094
| | || || | ||||| || || | ||| ||||| | | | || ||||| |||||
Sbjct 131003 TCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGTTA 130944
Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154
|| || ||||| | ||||| |||||| | ||| ||| | ||| |||| |||||
Sbjct 130943 CCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCG 130884
Query 80155 TTGGATGTACCA-TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213
|| || ||||| || || || | ||| || || |||||||||| || |||
Sbjct 130883 TTCGA-GTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGTT 130825
Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273
||||| || || ||||| | || ||||| | || || ||| | |||||||||||
Sbjct 130824 GAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGAT 130765
Query 80274 GCCCTCTATGCTATCATCAATCAT 80297
|| || ||| ||| || ||||
Sbjct 130764 ACCTTCGATGGAATCCTCCTTCAT 130741
Score = 100 bits (110), Expect = 4e-16
Identities = 94/117 (80%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 80674 ACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCT 80733
|| |||||||| | |||||| || |||||||| | ||||| | ||| |||| || |||
Sbjct 130038 ACCTCACTAAACACTTTTTTAGTCTCCTTGTGCAAGTTTGAAATGGCGATTCGAGCTGCT 129979
Query 80734 AAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAG 80789
||||| |||||||||||||||| || || ||||| |||||| |||||||||| ||
Sbjct 129978 AAAATTGCATAATCTGGATGTTTGGTCGT-CAAGTATGCTGCTGTTTCGGCTGCGAG 129923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268090709560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |