Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 149 9e-31 >seq1 Length=2435598 Score = 149 bits (164), Expect = 9e-31 Identities = 373/564 (66%), Gaps = 2/564 (0%) Strand=Plus/Minus Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 ||||| || ||||| ||||| ||| |||||| ||| |||| | ||| | ||| || | | Sbjct 131303 GCATCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 131244 Query 79795 CAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATAT 79854 || | | | || || || || | |||| | | || |||||| ||| Sbjct 131243 CATAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 131184 Query 79855 AATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATC 79914 | | ||||| | | ||| | |||| ||||||||||||| || | ||||||||| Sbjct 131183 AGTTCATCGAAAGCCTTTCCATGACAATCGGCTAATCCAGGACACTCATGTGGACACATC 131124 Query 79915 AACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 79974 || | |||||||||||| || | ||| || ||| || ||||| || ||||| | || Sbjct 131123 AAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACGCG 131064 Query 79975 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 80034 |||| ||| | | || | || || || || ||| ||| ||||||| || Sbjct 131063 TAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAAAG 131004 Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094 | | || || | ||||| || || | ||| ||||| | | | || ||||| ||||| Sbjct 131003 TCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGTTA 130944 Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || || ||||| | ||||| |||||| | ||| ||| | ||| |||| ||||| Sbjct 130943 CCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATACCG 130884 Query 80155 TTGGATGTACCA-TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 || || ||||| || || || | ||| || || |||||||||| || ||| Sbjct 130883 TTCGA-GTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGTT 130825 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 ||||| || || ||||| | || ||||| | || || ||| | ||||||||||| Sbjct 130824 GAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGAT 130765 Query 80274 GCCCTCTATGCTATCATCAATCAT 80297 || || ||| ||| || |||| Sbjct 130764 ACCTTCGATGGAATCCTCCTTCAT 130741 Score = 100 bits (110), Expect = 4e-16 Identities = 94/117 (80%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 80674 ACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCT 80733 || |||||||| | |||||| || |||||||| | ||||| | ||| |||| || ||| Sbjct 130038 ACCTCACTAAACACTTTTTTAGTCTCCTTGTGCAAGTTTGAAATGGCGATTCGAGCTGCT 129979 Query 80734 AAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAG 80789 ||||| |||||||||||||||| || || ||||| |||||| |||||||||| || Sbjct 129978 AAAATTGCATAATCTGGATGTTTGGTCGT-CAAGTATGCTGCTGTTTCGGCTGCGAG 129923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268090709560