Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq8 140 7e-28
seq5 123 6e-23
>seq8
Length=1050647
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | || | || || | ||| | |||||| || || || || || |||||
Sbjct 744584 ATTCCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCG 744525
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | ||||||||| |||||||| || || ||||| | |||||| |||||||||
Sbjct 744524 GAGAGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGA 744465
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||| | |||||||| || | |||||| || ||
Sbjct 744464 GGGATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCG 744405
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || || ||||| || | || || || || || |||||
Sbjct 744404 ACTTCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355
Score = 111 bits (122), Expect = 4e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 104382 TATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTT 104441
|||| ||| | ||| ||||||||||| | |||||| ||||| ||||| || | ||||
Sbjct 743793 TATAATCACTCAAAGTCCTACCGTCTTCCAATTGTTTACCAGCGAAAATAAGACGTTGTT 743734
Query 104442 GATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGC 104501
||||||| || || ||||||||||| |||||||| | ||| ||||| || | ||||||
Sbjct 743733 GATCAGGTGGGATACCTTCTTTATCTTGAATCTTGGATTTGACATTATCGATAGTATCGG 743674
Query 104502 TAGGTTCTACCTCT 104515
|| ||| ||||||
Sbjct 743673 AAGATTCGACCTCT 743660
Score = 107 bits (118), Expect = 4e-18
Identities = 130/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443
|| ||||| | || || || ||||| || || ||||||||||| || || | ||| |||
Sbjct 744758 TAATCAGACAATGTCCTGCCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGA 744699
Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503
||||| || || || || || || |||||||| | ||| || || || | |||||| |
Sbjct 744698 TCAGGTGGAATACCCTCCTTGTCTTGAATCTTGGATTTCACGTTATCGATCGTATCGGAA 744639
Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
| |||||||| | || ||||| || || || | ||||| ||||| || ||||||
Sbjct 744638 GACTCTACCTCCAACGTGATAGTTTTCCCTGTCAAAGTTTTGACAAAGATTTGCATT 744582
Score = 96.9 bits (106), Expect = 8e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 104396 GTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATT 104455
|| || || || || | || || ||||||||||| | ||||||||||||||| || ||
Sbjct 743348 GTCCTCCCATCCTCCAACTGCTTCCCAGCAAAAATCAACCTCTGTTGATCAGGTGGAATA 743289
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||||||||| |||||||||| ||| ||||| || | ||||| | ||| || ||
Sbjct 743288 CCTTCTTTATCTTGAATCTTTGATTTGACATTATCGATCGTATCTGATGATTCGACTTCG 743229
Query 104516 AGTGTAATAGTCT 104528
|| || || ||||
Sbjct 743228 AGGGTGATTGTCT 743216
>seq5
Length=1209326
Score = 123 bits (136), Expect = 6e-23
Identities = 133/176 (76%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || || || |||||||| ||||| || || || || || |||
Sbjct 1116753 GTAGACTCCTTCTGGATGTTGTAATCCGATAGAGTCCTACCATCCTCGAGCTGCTTGCCA 1116812
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | ||||||||||||||| || || || || || ||||| ||||| | ||
Sbjct 1116813 GCGAAGATCAACCTCTGTTGATCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 1116872
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAG 104538
||||| || | ||| ||| || || ||||| || || || |||||||| |||||
Sbjct 1116873 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCTGTAAG 1116928
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397234568932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |