Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 6e-22
seq1 107 3e-19
>seq3
Length=1267442
Score = 116 bits (128), Expect = 6e-22
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
||||| || ||||||||||| ||||||||||| ||||| |||||||| ||||||||||||
Sbjct 897098 CTTCGTGACAACATCCAAGGTATCACCAAGCCCGCTATTCGTCGTCTTGCTCGTCGTGGT 897039
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGT 16560
|| || |||||| |||| || ||| | || || |||| ||||| |||
Sbjct 897038 GGTGTTAAGCGTATCTCCGGGTTGATTTACGAGGAGACTCGTGGTGT 896992
>seq1
Length=2435598
Score = 107 bits (118), Expect = 3e-19
Identities = 88/107 (82%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
||||| || |||||||| || ||||| ||||| ||||| |||||||| ||||||||||||
Sbjct 1520989 CTTCGTGACAACATCCAGGGTATCACTAAGCCCGCTATTCGTCGTCTTGCTCGTCGTGGT 1521048
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGT 16560
|| ||||||||| ||||||| | | || ||||| | ||||| |||
Sbjct 1521049 GGTGTCAAGCGTATCTCTGGTCTCATTTACGAAGAAACTCGTGGTGT 1521095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075127769747
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |