Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 116 6e-22 seq1 107 3e-19 >seq3 Length=1267442 Score = 116 bits (128), Expect = 6e-22 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| || ||||||||||| ||||||||||| ||||| |||||||| |||||||||||| Sbjct 897098 CTTCGTGACAACATCCAAGGTATCACCAAGCCCGCTATTCGTCGTCTTGCTCGTCGTGGT 897039 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGT 16560 || || |||||| |||| || ||| | || || |||| ||||| ||| Sbjct 897038 GGTGTTAAGCGTATCTCCGGGTTGATTTACGAGGAGACTCGTGGTGT 896992 >seq1 Length=2435598 Score = 107 bits (118), Expect = 3e-19 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| || |||||||| || ||||| ||||| ||||| |||||||| |||||||||||| Sbjct 1520989 CTTCGTGACAACATCCAGGGTATCACTAAGCCCGCTATTCGTCGTCTTGCTCGTCGTGGT 1521048 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGT 16560 || ||||||||| ||||||| | | || ||||| | ||||| ||| Sbjct 1521049 GGTGTCAAGCGTATCTCTGGTCTCATTTACGAAGAAACTCGTGGTGT 1521095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075127769747