Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 >seq1 Length=2435598 Score = 143 bits (158), Expect = 3e-29 Identities = 374/565 (66%), Gaps = 4/565 (1%) Strand=Plus/Minus Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071 ||||| || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | | Sbjct 131303 GCATCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 131244 Query 63072 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTAT-AGT-GTAT 63129 || | | | || || || || |||| | | | || |||||| | | |||| Sbjct 131243 CATAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 131184 Query 63130 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 63189 | || | |||| | | ||| | || | | ||||||||||| |||| ||||||| Sbjct 131183 AGT-TCAT-CGAAAGCCTTTCCATGACAATCGGCTAATCCAGGACACTCATGTGGACACA 131126 Query 63190 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63249 |||| | ||||||||| || || | || || ||| || ||||| || ||||| | | Sbjct 131125 TCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACG 131066 Query 63250 CTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63309 | |||| ||| | | || | ||| || || || ||| ||| ||||||| | Sbjct 131065 CGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAA 131006 Query 63310 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63369 | | | || || | ||||| || || | ||| ||||| | | | || || || |||| Sbjct 131005 AGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGT 130946 Query 63370 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63429 | || || ||||| | ||||| |||||| | ||| ||| | ||| |||| |||| Sbjct 130945 TACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATAC 130886 Query 63430 CGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 63489 |||| || || || ||||| | ||| || || |||||||||| || ||| Sbjct 130885 CGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGT 130826 Query 63490 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549 ||||| || || ||||| | || ||||| | || || ||| | || ||||||| Sbjct 130825 TGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGA 130766 Query 63550 TACCCTCTATGCTATCATCGATCAT 63574 |||| || ||| ||| || |||| Sbjct 130765 TACCTTCGATGGAATCCTCCTTCAT 130741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946584839640