Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1 143 3e-29
>seq1
Length=2435598
Score = 143 bits (158), Expect = 3e-29
Identities = 374/565 (66%), Gaps = 4/565 (1%)
Strand=Plus/Minus
Query 63012 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63071
||||| || ||||| ||||||||| |||||| ||| |||| | ||| | ||| || | |
Sbjct 131303 GCATCTTTGTAAAGCATGAATGGACCACCAGTCTCAGTCTGTGCTTCGAGAATAGCGTAC 131244
Query 63072 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTAT-AGT-GTAT 63129
|| | | | || || || || |||| | | | || |||||| | | ||||
Sbjct 131243 CATAGTTTTTGCGCTTTGATCATCTTCCTGTACTTGCCCTGCCTCTCGTATGACTCGTAT 131184
Query 63130 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACA 63189
| || | |||| | | ||| | || | | ||||||||||| |||| |||||||
Sbjct 131183 AGT-TCAT-CGAAAGCCTTTCCATGACAATCGGCTAATCCAGGACACTCATGTGGACACA 131126
Query 63190 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63249
|||| | ||||||||| || || | || || ||| || ||||| || ||||| | |
Sbjct 131125 TCAAAGCCCACTCTCCATCCTCTTCTACACGACGCATGAAAAGATCCGGGATCCACAACG 131066
Query 63250 CTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63309
| |||| ||| | | || | ||| || || || ||| ||| ||||||| |
Sbjct 131065 CGTAGAATAAATCACGAGCTCGAACTTCTTCTTTACCGTGATTTTTTCGTAGATCGATAA 131006
Query 63310 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63369
| | | || || | ||||| || || | ||| ||||| | | | || || || ||||
Sbjct 131005 AGTCGAAAACGTCGGCGTGCCATGGCTCGAGGTAAATGGCAAAAGCACCTGGTCGCTTGT 130946
Query 63370 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63429
| || || ||||| | ||||| |||||| | ||| ||| | ||| |||| ||||
Sbjct 130945 TACCACCTTGATCGACGTATCGAGCGGTTGCGTCGTAAGCTCGAAGCATAGGAACGATAC 130886
Query 63430 CGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTG 63489
|||| || || || ||||| | ||| || || |||||||||| || |||
Sbjct 130885 CGTTCGAGTACCCGTTTGTACCAGCGATGTAAGAACCCTTGGCACGAATGTTGTGAATGT 130826
Query 63490 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGA 63549
||||| || || ||||| | || ||||| | || || ||| | || |||||||
Sbjct 130825 TGAGACCGATACCACCTGCTGTCTTGGAGATCATGGCACAAGTTTTGAGAGTATCATAGA 130766
Query 63550 TACCCTCTATGCTATCATCGATCAT 63574
|||| || ||| ||| || ||||
Sbjct 130765 TACCTTCGATGGAATCCTCCTTCAT 130741
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946584839640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |