Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 149 2e-30 >seq1 Length=2435598 Score = 149 bits (164), Expect = 2e-30 Identities = 233/328 (71%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||| ||||||||||| ||||||| ||| || || || | |||||| | || ||| Sbjct 130741 ATGAAGGAGGATTCCATCGAAGGTATCTATGATACTCTCAAAACTTGTGCCATGATCTCC 130800 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATT 363741 |||| ||||| || || ||| | || ||||| ||||||| || ||||| | Sbjct 130801 AAGACAGCAGGTGGTATCGGTCTCAACATTCACAACATTCGTGCCAAGGGTTCTTACA-T 130859 Query 363742 CGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| || ||| || |||||||| || | ||||| |||||||| | | ||| || Sbjct 130860 CGCTGGTACAAACGGGTACTCGAACGGTATCGTTCCTATGCTTCGAGCTTACGACGCAAC 130919 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGA 363860 || | |||||||| || ||||| ||||| ||| || ||||| || || ||||| Sbjct 130920 CGCTCGATACGTCGATCAAGGTGGTAACAAGCGACCAGGTGCTTTTGCCATTTACCTCGA 130979 Query 363861 GCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGAGG 363919 ||| || ||||| |||| || ||| | || || || ||||| ||| || ||||| | Sbjct 130980 GCCATGGCACGCCGACGTTTTCGACTTTATCGATCTACGAAAAAATCAC-GGTAAAGAAG 131038 Query 363920 AATTGCGTGCACGTGATCTGTTCTATGC 363947 || | || || |||||| | ||||| || Sbjct 131039 AAGTTCGAGCTCGTGATTTATTCTACGC 131066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352280761778