Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq8 111 1e-19 seq5 82.4 7e-11 >seq8 Length=1050647 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || || || || ||| | || || ||||||||||| | | Sbjct 744355 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAAACCATCACTCTCGAAGTCGAGTCTTCC 744414 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | || || |||||| ||||| ||||| || ||||| ||||| Sbjct 744415 GATACGATCGATAATGTAAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCTGATCAG 744474 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||||| || ||| || ||||||||||| | | | || ||| || ||| Sbjct 744475 CAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAAC 744534 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || ||||| || |||||| ||||||| || Sbjct 744535 ATCCAAAAGGAGTCTACACTTCATTTGGT 744563 >seq5 Length=1209326 Score = 82.4 bits (90), Expect = 7e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| || ||| | |||||||||||| | ||||| ||||| ||| Sbjct 1116913 ATCACCCTCGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 1116854 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || || || || || ||||||||||| |||| | || |||||||| ||||| ||| Sbjct 1116853 AAGGAGGGTATCCCACCTGATCAACAGAGGTTGATCTTCGCTGGCAAGCAGCTCGAGGAT 1116794 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | || | | ||||| ||||| || || || ||||| ||||||| || Sbjct 1116793 GGTAGGACTCTATCGGATTACAACATCCAGAAGGAGTCTACTCTTCATTTGGT 1116741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935586052245