Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8 104 2e-17 seq1 91.5 1e-13 seq5 89.7 5e-13 >seq8 Length=1050647 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || ||||| | || ||||||||||| |||||||| ||| Sbjct 744581 CCACCACGAAGTCGGAGAACCAAATGAAGTGTAGACTCCTTTTGGATGTTGTAGTCGGAG 744522 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || || || || || ||| | || || | |||||| || |||||| Sbjct 744521 AGAGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATCAACCTCTGCTGATCAGGAGGG 744462 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | ||||||| ||||||| Sbjct 744461 ATACCTTCCTTGTCTTGAATCTTGGACTTTACATTATCGATCGTATCGGAAGACTCGACT 744402 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||||||||| || | ||| || ||||| || ||||| Sbjct 744401 TCGAGAGTGATGGTTTTACCTGTCAAAGTCTTGACGAAGATTTGCAT 744355 >seq1 Length=2435598 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 145061 ACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGTTCA 145120 ||||| || ||||| || || | ||||||||| ||| | ||| ||| | || || Sbjct 132078 ACGACTTGGAACTCTCCAGCGAGCACACGACGAGTATAGATGTTGCTGGTGTAAGGCTCG 132019 Query 145121 AAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACCAAT 145180 || |||| || |||||||| |||| |||| ||||| ||||| ||| |||| Sbjct 132018 AAGCACTCATTCCATCCCAGGATCTGAGACGTCGACGCGGTAGGCATCGGCGCGACCAGG 131959 Query 145181 AATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCATAGC 145240 | || || | ||| ||||| || ||||| |||| || || ||| ||||| || Sbjct 131958 AGGGAGTTTCTCAGACCGTGTTTGGCGATGTTGGCCTTGAGAGTCGACCAGTCCCAGAGT 131899 Query 145241 GAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGG 145293 || ||||| | | |||||| |||| | |||| ||||||||||||| || Sbjct 131898 GAGGTCGGGGTAATACCCCACAGGTCGAATTGCAGCCTGCCCTCGCTGGCAGG 131846 >seq5 Length=1209326 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | || |||||||| || ||||||||||| Sbjct 1116723 CCACCACGAAGACGGAGGACCAAATGAAGAGTAGACTCCTTCTGGATGTTGTAATCCGAT 1116782 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||||| ||||||||||| ||| |||| || | ||| || || || ||| Sbjct 1116783 AGAGTCCTACCATCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGTTGATCAGGTGGG 1116842 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 1116843 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 1116902 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGA 131214 |||| ||| | ||| ||||| || ||| Sbjct 1116903 TCGAGGGTGATGGTCTTACCTGTAAGA 1116929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012333887360