Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq8 134 1e-26
>seq8
Length=1050647
Score = 134 bits (148), Expect = 1e-26
Identities = 159/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||||||||| |||||| ||||||| ||||||| ||||| ||
Sbjct 744355 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAAACCATCACTCTCGAAGTCGAGTCTTCC 744414
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || ||||| | ||| | || | ||| ||||| ||||| || || ||||| ||
Sbjct 744415 GATACGATCGATAATGTAAAGTCCAAGATTCA-AGACAAGGAAGGTATCCCTCCTGATCA 744473
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || | ||||| ||||| |||||| | ||||| | ||| ||| | ||| |||||
Sbjct 744474 GCAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAA 744533
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || || ||||| || ||
Sbjct 744534 CATCCAAAAGGAGTCTACACTTCATTTGGTTCT 744566
Score = 95.1 bits (104), Expect = 1e-14
Identities = 120/160 (75%), Gaps = 4/160 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| || |||||||| || ||| | ||||| | || || ||||| ||
Sbjct 744582 AATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTC 744641
Query 25058 TGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || ||||| | || |||| | || | ||| ||||| || || |||||||||||
Sbjct 744642 CGATACGATCGA-TAACGTGAAATCCAAGATTCAA-GACAAGGAGGGTATTCCACCTGAT 744699
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155
|| ||||| |||| ||||| || || || | |||||||
Sbjct 744700 CAGCAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATG 744739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327582786385
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |