Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03- 01] 79 sequences; 24,117,869 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq8 134 1e-26 >seq8 Length=1050647 Score = 134 bits (148), Expect = 1e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||||||||| |||||| ||||||| ||||||| ||||| || Sbjct 744355 ATGCAAATCTTCGTCAAGACTTTGACAGGTAAAACCATCACTCTCGAAGTCGAGTCTTCC 744414 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| | ||| | || | ||| ||||| ||||| || || ||||| || Sbjct 744415 GATACGATCGATAATGTAAAGTCCAAGATTCA-AGACAAGGAAGGTATCCCTCCTGATCA 744473 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | ||||| ||||| |||||| | ||||| | ||| ||| | ||| ||||| Sbjct 744474 GCAGAGGTTGATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACTCTCTCCGACTACAA 744533 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || ||||| || || Sbjct 744534 CATCCAAAAGGAGTCTACACTTCATTTGGTTCT 744566 Score = 95.1 bits (104), Expect = 1e-14 Identities = 120/160 (75%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || |||||||| || ||| | ||||| | || || ||||| || Sbjct 744582 AATGCAAATCTTTGTCAAAACTTTGACAGGGAAAACTATCACGTTGGAGGTAGAGTCTTC 744641 Query 25058 TGACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| | || |||| | || | ||| ||||| || || ||||||||||| Sbjct 744642 CGATACGATCGA-TAACGTGAAATCCAAGATTCAA-GACAAGGAGGGTATTCCACCTGAT 744699 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATG 25155 || ||||| |||| ||||| || || || | ||||||| Sbjct 744700 CAGCAGCGTCTTATCTTTGCTGGAAAGCAGCTCGAAGATG 744739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327582786385