Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solicoccozyma_20terricola_20[genbank_20GCA_5F001600875.1_202016-03-
01] 79 sequences; 24,117,869 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq4 96.9 7e-15
seq16 93.3 9e-14
>seq4
Length=1188950
Score = 96.9 bits (106), Expect = 7e-15
Identities = 132/182 (73%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238
|| ||||| ||| | || ||||| ||| | |||| | |||| || |||||| || ||
Sbjct 816877 GGTCCCAACGGTTCCGGAAAGTCCACCTTGGTCAAGCTTTTGACCGGTGAGACCGAGCCC 816818
Query 280239 A--CTGAGGGGTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295
| || | ||| | | |||||||| |||||| || || | |||||| |||||||||
Sbjct 816817 AACCTCGGTGGTGAGGTGTGGAAGCACCCCAACTTGGTTATCGGTTACGTTGCTCAGCAC 816758
Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355
||||||||||||||||| |||| || |||| || || | | ||||| ||||||
Sbjct 816757 GCTTTCCACCACATCGATCACCATCTCGACAAAACCCCGCTCGACTACATGTTGTGGCGA 816698
Query 280356 TA 280357
||
Sbjct 816697 TA 816696
Score = 91.5 bits (100), Expect = 3e-13
Identities = 359/555 (65%), Gaps = 20/555 (4%)
Strand=Plus/Minus
Query 279339 GAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTG 279398
||| | || ||||| ||||| ||||| ||||| ||||| || |||| ||||| ||
Sbjct 817714 GAGGCTGGAGAGGACTTGTGTAACTGTACCTTCTCCCTCGCGTACGGTGCCAAGATCTTG 817655
Query 279399 CTAAACT---CTACCCGCC-TCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCC 279454
|| ||| |||||| || || |||||||||| |||| || |||||| ||||
Sbjct 817654 CTCAACATGGCTACCCTCCGTC----TCAAGCGTGGTCACCGATACGGTCTCTGTGGTCG 817599
Query 279455 CAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATT 279514
|| || | ||||| ||| || ||| |||||| | |||||||| | ||||| ||
Sbjct 817598 TAACGGTTCCGGTAAATCCACCCTCATGAACGCCATCGTCAACGGTCAAGTCGAAGGTTT 817539
Query 279515 TCCTAACGCATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTC 279574
|| || |||||| || | || | || || | |||||||| ||| || |
Sbjct 817538 CCCAGACCCATCTGTCGTCCGAACTTTCTACGTTCAACACGACATTGACGGTTCCGAGGC 817479
Query 279575 GGATAGCACTGTGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCC 279634
|||| | | || |||||| || || | | || || | | || | | ||
Sbjct 817478 CGATATCTCCGTTGTCGACTGGGTAC--TC-GCCGATAAGCGTCTCC---TCGCCACCCC 817425
Query 279635 TGAGGAAATCA--TCCAGAAACTGGAGGCCAATGGTTTTGATGAA-AGAATGCGTAATCT 279691
|| || ||| |||| || | | ||||| || | |||| || || |
Sbjct 817424 GGATGACATCCGTTCCACT--CTCACCGACGTCGGTTTCGACGCCGAGAA-GCAAAAGCA 817368
Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751
| | ||||| || || |||||||||||||||||||| || ||| |||| ||||| |
Sbjct 817367 CTCGATCGGTTCCCTCTCCGGTGGTTGGAAGATGAAGCTCGCTCTCGCTCGAGCCATCTT 817308
Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811
| || ||| | || || || || ||||| ||||| || |||| ||||||
Sbjct 817307 GTTCAAGGCTGATATTCTTCTCCTCGACGAGCCTACCAATCATTTGGATGTTGTCAACGT 817248
Query 279812 AGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCA 279871
||||||| | |||||| || || | || | | ||| |||| ||||| ||
Sbjct 817247 CACCTGGCTCATCGACTACCTCACTTCCCTCACCAACTGTACCTCCATCATCGTCTCCCA 817188
Query 279872 CGACTCTGGCTTCCT 279886
|||||||| ||||||
Sbjct 817187 CGACTCTGACTTCCT 817173
>seq16
Length=848844
Score = 93.3 bits (102), Expect = 9e-14
Identities = 233/347 (67%), Gaps = 8/347 (2%)
Strand=Plus/Plus
Query 218466 CTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAGACCAACA--TCCCCGTCCCTGACTTC 218523
||| |||||||||| | | | ||||| ||| | ||| |||| || ||||||
Sbjct 569898 CTTTCAGCCCGGAACCTACCTTGACCA--CGATATCAGACAGGTCCCTCTCAAGGACTTC 569955
Query 218524 ATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGC-GT 218582
||| |||||||||| || || |||||| | || || || || |||| | ||
Sbjct 569956 ATCAACAAGGAGCTAATCCTCTTCTCGATGGCCGACAATATCCGATCCAT-CCCATCAGT 570014
Query 218583 GGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCT 218642
| || ||| | || || ||||| ||| |||| || | |||||| |||| ||
Sbjct 570015 CGCTGACGGCTTGAAACCTGGCCAGCGCAAGGTCCTATTCGGTTGCTTCAAGAGGAAACT 570074
Query 218643 GGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCA 218702
|| |||| || || || || || || | ||||| || || || | || |||||
Sbjct 570075 TGTAAAAGAGATCAAAGTTGCGCAACTTGCCGGTTACGTTTCTGAGAAGACTTCTTACCA 570134
Query 218703 TCACGGTGAGCAGAGTCTGCAGGGTGCC-ATTGTAGGCATGGCACAGGACTATGTGGGCA 218761
|||||| || |||||| || | || | || || || | || || || ||||| |
Sbjct 570135 TCACGGCGAACAGAGTTTG-ACCATGACTATCGTCGGTCTCGCTCAAACCTTCGTGGGAA 570193
Query 218762 GTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808
| |||||||| |||||||| |||||||||||| || ||| |||||
Sbjct 570194 GCAACAACATTAACTTGCTCGACCCCAACGGTCAATTCGGTACTCGT 570240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835759636439
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